RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 THRAP10827 490 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 TSPAN8P19075 237 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 DNAJB1P25685 340 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 CLCN5P51795 746 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 CYLC2Q14093 348 aaPredicted RBP13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 ZNF235Q14590 738 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 GPR158Q5T848 1215 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 TMEM207Q6UWW9 146 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 SPRED2Q7Z698 418 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 EXT2Q93063 718 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 CNDP1Q96KN2 507 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 RANBP9Q96S59 729 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 SPON2Q9BUD6 331 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 EMILIN2Q9BXX0 1053 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 GRIP2Q9C0E4 1043 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 ALG9Q9H6U8 611 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 APPL1Q9UKG1 709 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 VWA7Q9Y334 891 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 A0A1B0GTW7 788 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 A0A1B0GVM2 712 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 TCAF2A6NFQ2 919 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 SLCO1B7G3V0H7 640 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 NRG2O14511 850 aaPredicted RBP13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 CFLARO15519 480 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 IPO13O94829 963 aaKnown RBP13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 GLUD1P00367 558 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 RHOCP08134 193 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 GJA1P17302 382 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 PCSK6P29122 969 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 PMLP29590 882 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 MTTPP55157 894 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 SULT2A1Q06520 285 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 ZNF177Q13360 481 aaPredicted RBP13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 KLC3Q6P597 504 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 IYDQ6PHW0 289 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 DSELQ8IZU8 1212 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 RNF148Q8N7C7 305 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 OR13C4Q8NGS5 318 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 SLC22A17Q8WUG5 538 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 MRPS31Q92665 395 aaKnown RBP13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 DTNBP1Q96EV8 351 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 LRRC3Q9BY71 257 aa13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 POLR1EQ9GZS1 481 aaKnown RBP13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 DNAAF2Q9NVR5 837 aaKnown RBP13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 COPG1Q9Y678 874 aaKnown RBP13.86□□□□□ -0.19
PTCHD3-201ENST00000438700 SLC7A4O43246 635 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 NPHS1O60500 1241 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 S1PR4O95977 384 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 ENO3P13929 434 aaPredicted RBP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 HK2P52789 917 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 TNK2Q07912 1038 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 NADK2Q4G0N4 442 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 CHST9Q7L1S5 443 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 KYQ8NBH2 561 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 PDCD6IPQ8WUM4 868 aaKnown RBP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 POF1BQ8WVV4 589 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 USP13Q92995 863 aaPredicted RBP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 EXOC2Q96KP1 924 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 C17orf80Q9BSJ5 609 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 CCDC28BQ9BUN5 200 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 MFSD1Q9H3U5 465 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 RETREG1Q9H6L5 497 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 STOML2Q9UJZ1 356 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 MTCL1Q9Y4B5 1905 aaKnown RBP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 LOC285095A0A1B0GVY8 99 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 A0A1W2PRU2 124 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 SDHDO14521 159 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 CCL16O15467 120 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 GREM1O60565 184 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 PAPSS2O95340 614 aaPredicted RBP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 MT-CO1P00395 513 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 CKMP06732 381 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 KCNC1P48547 511 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 PKNOX1P55347 436 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 OXCT1P55809 520 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 PFKPQ01813 784 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 ELMOD1Q8N336 334 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 RYBPQ8N488 228 aaPredicted RBP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 MRPL43Q8N983 215 aaKnown RBP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 ICA1LQ8NDH6 482 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 ZFP28Q8NHY6 868 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 GABPB2Q8TAK5 448 aaPredicted RBP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 TSPAN17Q96FV3 270 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 CORO1BQ9BR76 489 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 ZNF385DQ9H6B1 395 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 ZBTB26Q9HCK0 441 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 LZTS1Q9Y250 596 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 HEMK1Q9Y5R4 338 aaPredicted RBP13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 IRAK3Q9Y616 596 aa13.85□□□□□ -0.19
PTCHD3-201ENST00000438700 CHD7Q9P2D1 2997 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 ILVBLA1L0T0 632 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 LINC01553A4QN01 128 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 STX16-NPEPL1H3BU86 382 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 DNAJA2O60884 412 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 GOT2P00505 430 aaKnown RBP13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 PRSS56P0CW18 603 aa13.84□□□□□ -0.19
PTCHD3-201ENST00000438700 PIM1P11309 404 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms