RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 PITRM1Q5JRX3 1037 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 ZNF678Q5SXM1 525 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 NKAPQ8N5F7 415 aaKnown RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 CPSF7Q8N684 471 aaKnown RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 ZNF557Q8N988 423 aaPredicted RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 OR2AP1Q8NGE2 309 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 KIAA1191Q96A73 305 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 ISG20Q96AZ6 181 aaKnown RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 SHCBP1LQ9BZQ2 653 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 WDR55Q9H6Y2 383 aaPredicted RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 BPIFA1Q9NP55 256 aa25.59■■□□□ 1.69
CPNE1-216ENST00000437340 MTF2Q9Y483 593 aaPredicted RBP25.59■■□□□ 1.69
CPNE1-216ENST00000437340 LAMA3Q16787 3333 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 VPS26AO75436 327 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 ZNF821O75541 412 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-216ENST00000437340 LMNAP02545 664 aaKnown RBP25.58■■□□□ 1.69
CPNE1-216ENST00000437340 HNRNPLP14866 589 aaKnown RBP eCLIP25.58■■□□□ 1.692e-8■□□□□ 10.1
CPNE1-216ENST00000437340 EPHA3P29320 983 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 CDKN1CP49918 316 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-216ENST00000437340 ERVK-21P61565 698 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 HERVK_113P63132 956 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 SULT2A1Q06520 285 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 KLF10Q13118 480 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 CERS6Q6ZMG9 384 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 LYSMD3Q7Z3D4 306 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 CUZD1Q86UP6 607 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 SPNS2Q8IVW8 549 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 FBXO27Q8NI29 283 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.58■■□□□ 1.692e-6■■■■■ 26.8
CPNE1-216ENST00000437340 ASB2Q96Q27 587 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 ATOH8Q96SQ7 321 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 ERVK-6Q9BXR3 956 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 PBX4Q9BYU1 374 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 GSTO2Q9H4Y5 243 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 GTSE1Q9NYZ3 720 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 CCL26Q9Y258 94 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 HS3ST2Q9Y278 367 aa25.58■■□□□ 1.69
CPNE1-216ENST00000437340 HELZP42694 1942 aaKnown RBP25.57■■□□□ 1.68
CPNE1-216ENST00000437340 GOLGA8QA0A0J9YX86 632 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 GOLGA8OA6NCC3 632 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 GOLGA8NF8WBI6 632 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 MOSPD3O75425 235 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 TM7SF2O76062 418 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 CPOXP36551 454 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 MXRA7P84157 204 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 TEAD2Q15562 447 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 PAQR3Q6TCH7 311 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 PHTF2Q8N3S3 785 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 STAG3L4Q8TBR4 150 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 MICAL1Q8TDZ2 1067 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 TCEAL4Q96EI5 215 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 SAMD11Q96NU1 681 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 RNPEPL1Q9HAU8 725 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 FAM50BQ9Y247 325 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 SLC30A1Q9Y6M5 507 aa25.57■■□□□ 1.68
CPNE1-216ENST00000437340 H3BMM5 538 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 KERAO60938 352 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 PEX11AO75192 247 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 ESR1P03372 595 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 SRCP12931 536 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 CTPS1P17812 591 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 GM2AP17900 193 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 SERPINA4P29622 427 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 SNRPD1P62314 119 aaKnown RBP25.56■■□□□ 1.68
CPNE1-216ENST00000437340 PTPRRQ15256 657 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 RAB44Q7Z6P3 723 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-216ENST00000437340 RYBPQ8N488 228 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-216ENST00000437340 OR6K2Q8NGY2 324 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 CFAP61Q8NHU2 1237 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 KCNJ9Q92806 393 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 EID2BQ96D98 161 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 TUBGCP5Q96RT8 1024 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 GPR21Q99679 349 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 CERS4Q9HA82 394 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 ZFYVE1Q9HBF4 777 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 MRGBPQ9NV56 204 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 NEMP1O14524 444 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 RFPL2O75678 378 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 PRAMEF12O95522 483 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 RHOP08100 348 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 HNRNPA1P09651 372 aaKnown RBP eCLIP25.56■■□□□ 1.68
CPNE1-216ENST00000437340 ALPIP09923 528 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 HLA-FP30511 346 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 PPARGP37231 505 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-216ENST00000437340 OR4D1Q15615 310 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 PDCD2Q16342 344 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-216ENST00000437340 SCUBE1Q8IWY4 988 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 ENDOVQ8N8Q3 282 aaKnown RBP25.56■■□□□ 1.68
CPNE1-216ENST00000437340 ZNF385DQ9H6B1 395 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 TDP1Q9NUW8 608 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 ZMYM5Q9UJ78 669 aa25.56■■□□□ 1.68
CPNE1-216ENST00000437340 COX4I1P13073 169 aa25.55■■□□□ 1.68
CPNE1-216ENST00000437340 NAA20P61599 178 aa25.55■■□□□ 1.68
CPNE1-216ENST00000437340 GPM6BQ13491 265 aa25.55■■□□□ 1.68
CPNE1-216ENST00000437340 UNC50Q53HI1 259 aa25.55■■□□□ 1.68
CPNE1-216ENST00000437340 DGKKQ5KSL6 1271 aa25.55■■□□□ 1.68
CPNE1-216ENST00000437340 CTSL3PQ5NE16 218 aa25.55■■□□□ 1.68
CPNE1-216ENST00000437340 GRIN3AQ8TCU5 1115 aa25.55■■□□□ 1.68
CPNE1-216ENST00000437340 LYSMD1Q96S90 227 aa25.55■■□□□ 1.68
CPNE1-216ENST00000437340 CEP44Q9C0F1 390 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms