RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 WNT9AO14904 365 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 MMP20O60882 483 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 KRT37O76014 449 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 GM2AP17900 193 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 ITGALP20701 1170 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 ATP5DP30049 168 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 SPRP35270 261 aaPredicted RBP22.91■■□□□ 1.26
CPSF4-204ENST00000436336 MPP1Q00013 466 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 SEMA3AQ14563 771 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 TYSND1Q2T9J0 566 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 TNFAIP8L3Q5GJ75 292 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 PSAPL1Q6NUJ1 521 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 CYP4X1Q8N118 509 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.91■■□□□ 1.26
CPSF4-204ENST00000436336 ARL8AQ96BM9 186 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 TCF12Q99081 682 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 ASB8Q9H765 288 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 CD84Q9UIB8 345 aa22.91■■□□□ 1.26
CPSF4-204ENST00000436336 AHSGP02765 367 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 NFATC2Q13469 925 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 CHRNA6Q15825 494 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 GPR33Q49SQ1 333 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 SPEM1Q8N4L4 309 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 TSTD1Q8NFU3 115 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 OR14C36Q8NHC7 312 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 ZNF398Q8TD17 642 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 EDAQ92838 391 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 DTD2Q96FN9 168 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 INTS10Q9NVR2 710 aaKnown RBP22.9■■□□□ 1.26
CPSF4-204ENST00000436336 C2orf42Q9NWW7 574 aa22.9■■□□□ 1.26
CPSF4-204ENST00000436336 GOLGA8CPA6NN73 597 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 AGAP14A8MT82 685 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 PFDN6O15212 129 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 LZTS3O60299 673 aaPredicted RBP22.89■■□□□ 1.26
CPSF4-204ENST00000436336 PCDH8O95206 1070 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 S1PR4O95977 384 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 SNRPAP09012 282 aaKnown RBP22.89■■□□□ 1.26
CPSF4-204ENST00000436336 PRSS56P0CW18 603 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 GABRB3P28472 473 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 PMLP29590 882 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 TTPAP49638 278 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 LIMK2P53671 638 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 ADPRHP54922 357 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 ILF2Q12905 390 aaKnown RBP22.89■■□□□ 1.26
CPSF4-204ENST00000436336 ITGA9Q13797 1035 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 TTMPQ5BVD1 217 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 CERS6Q6ZMG9 384 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 LDB1Q86U70 411 aaPredicted RBP22.89■■□□□ 1.26
CPSF4-204ENST00000436336 PGBD3Q8N328 593 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 MTBPQ96DY7 904 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 ATP6V1G3Q96LB4 118 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 IER2Q9BTL4 223 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 KDM4CQ9H3R0 1056 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 RHOJQ9H4E5 214 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 FAM96AQ9H5X1 160 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 ITM2CQ9NQX7 267 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 FBXO6Q9NRD1 293 aaPredicted RBP22.89■■□□□ 1.26
CPSF4-204ENST00000436336 KCTD5Q9NXV2 234 aa22.89■■□□□ 1.26
CPSF4-204ENST00000436336 DOCK9Q9BZ29 2069 aa22.89■■□□□ 1.25
CPSF4-204ENST00000436336 TRBV5-4A0A0C4DH59 114 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 RECQL5O94762 991 aaPredicted RBP22.88■■□□□ 1.25
CPSF4-204ENST00000436336 ITGA2BP08514 1039 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 F7P08709 466 aaPredicted RBP22.88■■□□□ 1.25
CPSF4-204ENST00000436336 KRT15P19012 456 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 CD151P48509 253 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 CDKN1CP49918 316 aaPredicted RBP22.88■■□□□ 1.25
CPSF4-204ENST00000436336 TPMTP51580 245 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 HENMT1Q5T8I9 393 aaKnown RBP22.88■■□□□ 1.25
CPSF4-204ENST00000436336 ZNF765Q7L2R6 523 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 ZC3HC1Q86WB0 502 aaKnown RBP22.88■■□□□ 1.25
CPSF4-204ENST00000436336 PIANPQ8IYJ0 282 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 MZB1Q8WU39 189 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 ZSCAN5AQ9BUG6 496 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 ABCG8Q9H221 673 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 PREBQ9HCU5 417 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 USP36Q9P275 1121 aaKnown RBP22.88■■□□□ 1.25
CPSF4-204ENST00000436336 VPS9D1Q9Y2B5 631 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 COQ6Q9Y2Z9 468 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 NUMA1Q14980 2115 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 TM7SF2O76062 418 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 HAUS5O94927 633 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 PPARGP37231 505 aaPredicted RBP22.88■■□□□ 1.25
CPSF4-204ENST00000436336 ZNF284Q2VY69 593 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 RNF187Q5TA31 235 aaPredicted RBP22.88■■□□□ 1.25
CPSF4-204ENST00000436336 LYPLAL1Q5VWZ2 237 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 ANO7Q6IWH7 933 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 KIAA1161Q6NSJ0 714 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 NEK5Q6P3R8 708 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 TAS2R42Q7RTR8 314 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 TRAM1L1Q8N609 369 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 SCAMP4Q969E2 229 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 AP2M1Q96CW1 435 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 NUS1Q96E22 293 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 VPS39Q96JC1 886 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 TTC1Q99614 292 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 SPATA16Q9BXB7 569 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 CRLS1Q9UJA2 301 aa22.88■■□□□ 1.25
CPSF4-204ENST00000436336 NOVA2Q9UNW9 492 aaKnown RBP22.88■■□□□ 1.25
CPSF4-204ENST00000436336 HMGB1P1B2RPK0 211 aaPredicted RBP22.87■■□□□ 1.25
CPSF4-204ENST00000436336 MAGEA9P43362 315 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms