RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 APTXQ7Z2E3 356 aaKnown RBP7.73□□□□□ -1.17
VPS50-203ENST00000436177 HSD11B1LQ7Z5J1 315 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 ZFAND4Q86XD8 727 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS50-203ENST00000436177 IL22RA1Q8N6P7 574 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 ARFGAP1Q8N6T3 406 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 OR10G6Q8NH81 332 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 GPBAR1Q8TDU6 330 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 TEKT4Q8WW24 435 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 EXTL1Q92935 676 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 KIAA1143Q96AT1 154 aaPredicted RBP7.73□□□□□ -1.17
VPS50-203ENST00000436177 AP2M1Q96CW1 435 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 SCRN2Q96FV2 425 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 CCDC74BQ96LY2 380 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 ZNF830Q96NB3 372 aaPredicted RBP7.73□□□□□ -1.17
VPS50-203ENST00000436177 SEMA3CQ99985 751 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 NUDT22Q9BRQ3 303 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 SYT11Q9BT88 431 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 ANP32EQ9BTT0 268 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 FRMD8Q9BZ67 464 aaPredicted RBP7.73□□□□□ -1.17
VPS50-203ENST00000436177 ASPSCR1Q9BZE9 553 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 SEMA4CQ9C0C4 833 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 SEMA6CQ9H3T2 930 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 SPATS2LQ9NUQ6 558 aaKnown RBP7.73□□□□□ -1.17
VPS50-203ENST00000436177 AIPL1Q9NZN9 384 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 FOXJ2Q9P0K8 574 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 ANAPC7Q9UJX3 599 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 BZW2Q9Y6E2 419 aaKnown RBP7.73□□□□□ -1.17
VPS50-203ENST00000436177 IGHV5-10-1A0A0J9YXX1 117 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 MYO1FO00160 1098 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 MAFKO60675 156 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 PPFIA2O75334 1257 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 FGF1P05230 155 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 CEACAM5P06731 702 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 FAM87AP0C7U9 286 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 RARAP10276 462 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 SKILP12757 684 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 SLC2A4P14672 509 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 ZNF30P17039 623 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 CR2P20023 1033 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 LHCGRP22888 699 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 CES1P23141 567 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 AK4P27144 223 aaPredicted RBP7.72□□□□□ -1.17
VPS50-203ENST00000436177 IL1R2P27930 398 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 ADCY8P40145 1251 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 ETV5P41161 510 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 ZNF165P49910 485 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 RAB15P59190 212 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 GPLD1P80108 840 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 B4GALNT1Q00973 533 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 C16orf72Q14CZ0 275 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 LRRC66Q68CR7 880 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 ADAMTSL4Q6UY14 1074 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 ATG14Q6ZNE5 492 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 CYP4V2Q6ZWL3 525 aaPredicted RBP7.72□□□□□ -1.17
VPS50-203ENST00000436177 ZNF438Q7Z4V0 828 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 POLNQ7Z5Q5 900 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 TSPAN33Q86UF1 283 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 TRIM74Q86UV6 250 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 MAP7D3Q8IWC1 876 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 SFTPA2Q8IWL1 248 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 NRSN1Q8IZ57 195 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 AVL9Q8NBF6 648 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 KCTD6Q8NC69 237 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 RCBTB1Q8NDN9 531 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 OR4D9Q8NGE8 314 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 JPH3Q8WXH2 748 aaPredicted RBP7.72□□□□□ -1.17
VPS50-203ENST00000436177 ART4Q93070 314 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 TAAR9Q96RI9 348 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 MCCC1Q96RQ3 725 aaPredicted RBP7.72□□□□□ -1.17
VPS50-203ENST00000436177 SLC38A3Q99624 504 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 BPIFA3Q9BQP9 254 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 NUP85Q9BW27 656 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 B3GNT4Q9C0J1 378 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 PCDH18Q9HCL0 1135 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 ETNK2Q9NVF9 386 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 SLC39A1Q9NY26 324 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 RCOR3Q9P2K3 495 aaPredicted RBP7.72□□□□□ -1.17
VPS50-203ENST00000436177 ZNHIT2Q9UHR6 403 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 CD84Q9UIB8 345 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 SLC17A4Q9Y2C5 497 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 TMEM98Q9Y2Y6 226 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 PTPN13Q12923 2485 aa7.72□□□□□ -1.17
VPS50-203ENST00000436177 CHD5Q8TDI0 1954 aa7.71□□□□□ -1.17
VPS50-203ENST00000436177 A0A1B0GTH6 734 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 C9orf172C9J069 976 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 PYCARD-AS1I3L0S3 204 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 INPP4BO15327 924 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 B4GAT1O43505 415 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 MFSD11O43934 449 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 WISP1O95388 367 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 TPM3P06753 285 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 CCL4P13236 92 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 GM2AP17900 193 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 MX2P20592 715 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 CD1CP29017 333 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 GARSP41250 739 aaKnown RBP7.71□□□□□ -1.18
VPS50-203ENST00000436177 MAPK9P45984 424 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 POLD2P49005 469 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 RPL26P61254 145 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms