RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 TP53I13Q8NBR0 393 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-214ENST00000435747 OR6K2Q8NGY2 324 aa10.4□□□□□ -0.74
CPNE1-214ENST00000435747 PNPLA2Q96AD5 504 aa10.4□□□□□ -0.74
CPNE1-214ENST00000435747 SNRNP40Q96DI7 357 aaKnown RBP10.4□□□□□ -0.74
CPNE1-214ENST00000435747 ARHGEF26Q96DR7 871 aa10.4□□□□□ -0.74
CPNE1-214ENST00000435747 HMCESQ96FZ2 354 aa10.4□□□□□ -0.74
CPNE1-214ENST00000435747 PDXPQ96GD0 296 aa10.4□□□□□ -0.74
CPNE1-214ENST00000435747 DPYSL5Q9BPU6 564 aa10.4□□□□□ -0.74
CPNE1-214ENST00000435747 ISCUQ9H1K1 167 aa10.4□□□□□ -0.74
CPNE1-214ENST00000435747 SEPT11Q9NVA2 429 aaKnown RBP10.4□□□□□ -0.74
CPNE1-214ENST00000435747 MFHAS1Q9Y4C4 1052 aa10.4□□□□□ -0.74
CPNE1-214ENST00000435747 ANKRD36A6QL64 1941 aa10.4□□□□□ -0.74
CPNE1-214ENST00000435747 PIPSLA2A3N6 862 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 ZSCAN5CA6NGD5 496 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-214ENST00000435747 C16orf96A6NNT2 1141 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 RASA4BC9J798 803 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 RASA4O43374 803 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 FAM155BO75949 473 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 TMCC1O94876 653 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 TNFAIP3P21580 790 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 CSF2RBP32927 897 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 HTR7P34969 479 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 DNA2P51530 1060 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 CDK18Q07002 472 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 NR1D2Q14995 579 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 CYTH1Q15438 398 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 CHRNA6Q15825 494 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 MYLK3Q32MK0 819 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 PARP15Q460N3 678 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 ZNF805Q5CZA5 627 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 ATXN7L2Q5T6C5 722 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-214ENST00000435747 PAPD7Q5XG87 772 aaKnown RBP10.39□□□□□ -0.75
CPNE1-214ENST00000435747 SLC6A19Q695T7 634 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 PPP1R2P3Q6NXS1 205 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 NYAP1Q6ZVC0 841 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 ARHGAP12Q8IWW6 846 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 CXorf40AQ8TE69 158 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 CASKIN2Q8WXE0 1202 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 WDR92Q96MX6 357 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 RANBP9Q96S59 729 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 ZDHHC6Q9H6R6 413 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 CBX8Q9HC52 389 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 MLXIPLQ9NP71 852 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 ACSS2Q9NR19 701 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 PARVAQ9NVD7 372 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 ASF1BQ9NVP2 202 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 GPATCH2LQ9NWQ4 482 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 TMEM9Q9P0T7 183 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 LHX3Q9UBR4 397 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 NENFQ9UMX5 172 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 PCDHGB7Q9Y5F8 929 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 DGKBQ9Y6T7 804 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 STAB1Q9NY15 2570 aa10.39□□□□□ -0.75
CPNE1-214ENST00000435747 A0A1W2PQJ5 194 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 TSPAN11A1L157 253 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 SYCE3A1L190 88 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 TMCO5BA8MYB1 307 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 EIF3CLB5ME19 914 aaKnown RBP10.38□□□□□ -0.75
CPNE1-214ENST00000435747 FGF10O15520 208 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-214ENST00000435747 LRRTM2O43300 516 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 CREB3O43889 395 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 ZG16O60844 167 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 MMP20O60882 483 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 CREG1O75629 220 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 POP4O95707 220 aaKnown RBP10.38□□□□□ -0.75
CPNE1-214ENST00000435747 FTLP02792 175 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-214ENST00000435747 UGT2B4P06133 528 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 SNRPB2P08579 225 aaKnown RBP10.38□□□□□ -0.75
CPNE1-214ENST00000435747 TCF4P15884 667 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 NFKBIAP25963 317 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 GPR3P46089 330 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 PPM1FP49593 454 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-214ENST00000435747 CCL11P51671 97 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 NDST2P52849 883 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 ITGA1P56199 1179 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 SNRPD1P62314 119 aaKnown RBP10.38□□□□□ -0.75
CPNE1-214ENST00000435747 ASIC2Q16515 512 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 CPZQ66K79 652 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 SCYL2Q6P3W7 929 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 TMEM71Q6P5X7 295 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 DCUN1D2Q6PH85 259 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 LYSMD3Q7Z3D4 306 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 LUZP1Q86V48 1076 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 IQCKQ8N0W5 287 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 NPWQ8N729 165 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 NETO2Q8NC67 525 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 NSMCE3Q96MG7 304 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 KCTD15Q96SI1 283 aaPredicted RBP10.38□□□□□ -0.75
CPNE1-214ENST00000435747 EIF3CQ99613 913 aaKnown RBP10.38□□□□□ -0.75
CPNE1-214ENST00000435747 APOOQ9BUR5 198 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 SNRNP25Q9BV90 132 aaKnown RBP10.38□□□□□ -0.75
CPNE1-214ENST00000435747 OSBPL1AQ9BXW6 950 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 APMAPQ9HDC9 416 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 FBXO8Q9NRD0 319 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 AP4E1Q9UPM8 1137 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 CNTRLQ7Z7A1 2325 aa10.38□□□□□ -0.75
CPNE1-214ENST00000435747 ABCA4P78363 2273 aa10.37□□□□□ -0.75
CPNE1-214ENST00000435747 A8MU76 341 aa10.37□□□□□ -0.75
CPNE1-214ENST00000435747 J3KR12 359 aa10.37□□□□□ -0.75
CPNE1-214ENST00000435747 KRIT1O00522 736 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms