RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 CWC15Q9P013 229 aaKnown RBP11.53□□□□□ -0.56
CHRNA1-207ENST00000435083 KLHL3Q9UH77 587 aa11.53□□□□□ -0.56
CHRNA1-207ENST00000435083 ZNHIT2Q9UHR6 403 aa11.53□□□□□ -0.56
CHRNA1-207ENST00000435083 POLR1CO15160 346 aaPredicted RBP11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 INPP4BO15327 924 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 MTSS1O43312 755 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 PGLSO95336 258 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 SOD1P00441 154 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 NR1D1P20393 614 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 MIPP30301 263 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 HCAR3P49019 387 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 MAMLD1Q13495 774 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 CT47A1Q5JQC4 288 aaPredicted RBP11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 ARMC12Q5T9G4 340 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 CDKAL1Q5VV42 579 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 WDR74Q6RFH5 385 aaPredicted RBP11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 ATCAYQ86WG3 371 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 ENOX1Q8TC92 643 aaKnown RBP11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 SCAMP4Q969E2 229 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 RNF31Q96EP0 1072 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 PSMG3-AS1Q96PY0 264 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 NUP62CLQ9H1M0 184 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 STN1Q9H668 368 aaKnown RBP11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 TAS2R14Q9NYV8 317 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 TP53TG5Q9Y2B4 290 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 PRKAB1Q9Y478 270 aa11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 TMEM184BQ9Y519 407 aaPredicted RBP11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 MRPS18BQ9Y676 258 aaKnown RBP11.52□□□□□ -0.57
CHRNA1-207ENST00000435083 PEX11BO96011 259 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 AMPD1P23109 780 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 COPB1P53618 953 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 LRP8Q14114 963 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 DPYSQ14117 519 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 LRRC66Q68CR7 880 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 CHST15Q7LFX5 561 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 NDUFAF2Q8N183 169 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 ESX1Q8N693 406 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 TEX19Q8NA77 164 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 NSMCE1Q8WV22 266 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 MIB2Q96AX9 1013 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 SH3KBP1Q96B97 665 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 SMIM14Q96QK8 99 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 MCCC1Q96RQ3 725 aaPredicted RBP11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 AGAP2Q99490 1192 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 MGME1Q9BQP7 344 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 ZWILCHQ9H900 591 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 SARS2Q9NP81 518 aaKnown RBP11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 FANCLQ9NW38 375 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 PCDHB3Q9Y5E6 796 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 RPS6KL1Q9Y6S9 549 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 COL12A1Q99715 3063 aa11.51□□□□□ -0.57
CHRNA1-207ENST00000435083 H3BRJ5 948 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 K7EM74 188 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 MAFKO60675 156 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 SNX2O60749 519 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 DLGAP3O95886 979 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 ATP1A1P05023 1023 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 PDHA1P08559 390 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 FERP16591 822 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 ARL4AP40617 200 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 STAT5AP42229 794 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 MMP13P45452 471 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 ZNF135P52742 658 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 MLLT10P55197 1068 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 UBXN1Q04323 297 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 ITKQ08881 620 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 MARC1Q5VT66 337 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 PLEKHA7Q6IQ23 1121 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 TMCO3Q6UWJ1 677 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 CYP4V2Q6ZWL3 525 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 PSTKQ8IV42 348 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 EXD1Q8NHP7 514 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 PIH1D2Q8WWB5 315 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 RIOK2Q9BVS4 552 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 TRIM7Q9C029 511 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 ETNK2Q9NVF9 386 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 CNOT8Q9UFF9 292 aaKnown RBP11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 TBC1D29Q9UFV1 150 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 KCNK6Q9Y257 313 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 PPIL1Q9Y3C6 166 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 KCTD3Q9Y597 815 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 KCNMB2Q9Y691 235 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 TMEM191CA6NGB0 347 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 MKRN2OSH3BPM6 223 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 PYGLP06737 847 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 KRT7P08729 469 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 CCDC172P0C7W6 258 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 F8A1P23610 371 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 DLSTP36957 453 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 EPHB1P54762 984 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 PTSQ03393 145 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 FOXM1Q08050 763 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 ERV3-1Q14264 604 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 CRTC2Q53ET0 693 aaPredicted RBP11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 RALGPS1Q5JS13 557 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 HIST2H2BCQ6DN03 193 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 IYDQ6PHW0 289 aa11.5□□□□□ -0.57
CHRNA1-207ENST00000435083 ZNF765Q7L2R6 523 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms