RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 HMBOX1Q6NT76 420 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 FAM117BQ6P1L5 589 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 KCNT2Q6UVM3 1135 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 OLFML1Q6UWY5 402 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 AQP12AQ8IXF9 295 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 KLHDC8BQ8IXV7 354 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PLD6Q8N2A8 252 aaKnown RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SCAIQ8N9R8 606 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 FAM156AQ8NDB6 213 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ZNF540Q8NDQ6 660 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 STYXQ8WUJ0 223 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 HTR3CQ8WXA8 447 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 EFHD2Q96C19 240 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ANKRD36BP1Q96IX9 119 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 COG8Q96MW5 612 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ZNF641Q96N77 438 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TCF12Q99081 682 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 CGREF1Q99674 301 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SLC29A1Q99808 456 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SMOC1Q9H4F8 434 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 LRRC4Q9HBW1 653 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TRIM39Q9HCM9 518 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ITM2CQ9NQX7 267 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 CCM2LQ9NUG4 571 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 RIC8BQ9NVN3 520 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TMEM181Q9P2C4 612 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 HESX1Q9UBX0 185 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ERGIC3Q9Y282 383 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 FAM32AQ9Y421 112 aaKnown RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 COPG1Q9Y678 874 aaKnown RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 A0A096LPK6 155 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 ZCWPW2A0A1B0GU75 182 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 HEATR9A2RTY3 570 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 TRPC5OSA6NMA1 111 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 PIK3R2O00459 728 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 ATE1O95260 518 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 TNNC2P02585 160 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 C2P06681 752 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 OCM2P0CE71 109 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 OCMP0CE72 109 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CYP2C9P11712 490 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CD19P15391 556 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CD1EP15812 388 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CCND3P30281 292 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 GNL1P36915 607 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 TNFSF9P41273 254 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 RPL34P49207 117 aaKnown RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 OAZ1P54368 228 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 HMGCS2P54868 508 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 C21orf59P57076 290 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 DNAJB13P59910 316 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 PSMA6P60900 246 aaKnown RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 FOXK2Q01167 660 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CAPSQ13938 189 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 WSCD2Q2TBF2 565 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 HSDL1Q3SXM5 330 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 TRIM61Q5EBN2 209 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 ZNF667Q5HYK9 610 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 SAMD4BQ5PRF9 694 aaKnown RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 SH3PXD2AQ5TCZ1 1133 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 FSTL4Q6MZW2 842 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 FRA10AC1Q70Z53 315 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CCDC80Q76M96 950 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 SPRED1Q7Z699 444 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CAMK1DQ8IU85 385 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CLVS1Q8IUQ0 354 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 HERC6Q8IVU3 1022 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 LSMEM2Q8N112 164 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CENPSQ8N2Z9 138 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 KDM1BQ8NB78 822 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 C1orf162Q8NEQ5 155 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 GPRC5AQ8NFJ5 357 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 LRTOMTQ8WZ04 291 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 TANKQ92844 425 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 ASIC4Q96FT7 647 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 FEM1CQ96JP0 617 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 FAR2Q96K12 515 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 GPR22Q99680 433 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 PSD2Q9BQI7 771 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 ELOVL4Q9GZR5 314 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 C2orf40Q9H1Z8 148 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 LRRC40Q9H9A6 602 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 GPN2Q9H9Y4 310 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 LIN28AQ9H9Z2 209 aaKnown RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CXorf21Q9HAI6 301 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 TMEM165Q9HC07 324 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 SPAG4Q9NPE6 437 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 CACNA2D2Q9NY47 1150 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 DTLQ9NZJ0 730 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 TXNDC16Q9P2K2 825 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 ABCD2Q9UBJ2 740 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 AASSQ9UDR5 926 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 SIX4Q9UIU6 781 aa8.05□□□□□ -1.12
VTI1A-202ENST00000432306 TDRKHQ9Y2W6 561 aaKnown RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 TNPO3Q9Y5L0 923 aaKnown RBP8.05□□□□□ -1.12
VTI1A-202ENST00000432306 MAGEB16A2A368 324 aa8.04□□□□□ -1.12
VTI1A-202ENST00000432306 TRIM43BA6NCK2 446 aa8.04□□□□□ -1.12
VTI1A-202ENST00000432306 LRRIQ4A6NIV6 560 aa8.04□□□□□ -1.12
VTI1A-202ENST00000432306 ERI2A8K979 691 aaKnown RBP8.04□□□□□ -1.12
VTI1A-202ENST00000432306 NOP56O00567 594 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms