RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 ZNF395Q9H8N7 513 aaPredicted RBP9.39□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CARS2Q9HA77 564 aaKnown RBP9.39□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CBX8Q9HC52 389 aa9.39□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SPATS2LQ9NUQ6 558 aaKnown RBP9.39□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CAPN11Q9UMQ6 739 aa9.39□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SUFUQ9UMX1 484 aa9.39□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SLC17A4Q9Y2C5 497 aa9.39□□□□□ -0.91
CDC42-IT1-201ENST00000431803 LOXL2Q9Y4K0 774 aa9.39□□□□□ -0.91
CDC42-IT1-201ENST00000431803 TLN1Q9Y490 2541 aaKnown RBP9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CAPN8A6NHC0 703 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 MYO1FO00160 1098 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 EFSO43281 561 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 GYPCP04921 128 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 FGF1P05230 155 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 IVLP07476 585 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PDHA1P08559 390 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 JMJD7P0C870 316 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PLA2G2AP14555 144 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 MAZP56270 477 aaKnown RBP9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ILF3Q12906 894 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ARHGEF7Q14155 803 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 DPYSL3Q14195 570 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 KRT81Q14533 505 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PAFAH1B3Q15102 231 aaKnown RBP9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CLPPQ16740 277 aaPredicted RBP9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 TAF1BQ53T94 588 aaPredicted RBP9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 LRRC66Q68CR7 880 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 DENND2CQ68D51 928 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 NCBP2-AS2Q69YL0 99 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 RAET1GQ6H3X3 334 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ALKBH5Q6P6C2 394 aaKnown RBP9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ADAMTSL4Q6UY14 1074 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 LUZP1Q86V48 1076 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ZDHHC1Q8WTX9 485 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 IQCDQ96DY2 449 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CCNL2Q96S94 520 aaPredicted RBP9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SEMA3CQ99985 751 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ZNF670Q9BS34 389 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 GSDMCQ9BYG8 508 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SEMA4CQ9C0C4 833 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 POLR1EQ9GZS1 481 aaKnown RBP9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PRM3Q9NNZ6 103 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 NT5MQ9NPB1 228 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 TAAR2Q9P1P5 351 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PISDQ9UG56 409 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 MOSPD1Q9UJG1 213 aa9.38□□□□□ -0.91
CDC42-IT1-201ENST00000431803 A0A0J9YYE9 177 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 A0A0U1RQS6 177 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SYCE3A1L190 88 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 FIGNL2A6NMB9 653 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 MATN3O15232 486 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 B4GAT1O43505 415 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ECEL1O95672 775 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CPNE6O95741 557 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 TRBC1P01850 177 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ZNF30P17039 623 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CTPS1P17812 591 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ITIH1P19827 911 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 AK4P27144 223 aaPredicted RBP9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 HNRNPH3P31942 346 aaKnown RBP9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ADCY8P40145 1251 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ETV5P41161 510 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 GPR3P46089 330 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 GNPDA1P46926 289 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 POLD2P49005 469 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 UBASH3AP57075 661 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CTBSQ01459 385 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PTSQ03393 145 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 TGIF1Q15583 401 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ZSCAN23Q3MJ62 389 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 MAP9Q49MG5 647 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SLC30A9Q6PML9 568 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CCDC81Q6ZN84 652 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 RFLNAQ6ZTI6 216 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ZNF765Q7L2R6 523 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 NLRP8Q86W28 1048 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CPNE8Q86YQ8 564 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 JAMLQ86YT9 394 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 NAGSQ8N159 534 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ZNF564Q8TBZ8 553 aaPredicted RBP9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 FAF2Q96CS3 445 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 AP2M1Q96CW1 435 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 TSGA13Q96PP4 275 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SMIM14Q96QK8 99 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 INSM2Q96T92 566 aaPredicted RBP9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CMKLR1Q99788 373 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 TDRD1Q9BXT4 1180 aaKnown RBP9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 B3GNT4Q9C0J1 378 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CDH19Q9H159 772 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ABCG8Q9H221 673 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SEMA6CQ9H3T2 930 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 RDH14Q9HBH5 336 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 AMACRQ9UHK6 382 aa9.37□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SPTA1P02549 2419 aa9.36□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PRAMEF33A0A0G2JMD5 474 aa9.36□□□□□ -0.91
CDC42-IT1-201ENST00000431803 GOLGA6CA6NDK9 693 aa9.36□□□□□ -0.91
CDC42-IT1-201ENST00000431803 GOLGA6BA6NDN3 693 aa9.36□□□□□ -0.91
CDC42-IT1-201ENST00000431803 C9orf172C9J069 976 aa9.36□□□□□ -0.91
CDC42-IT1-201ENST00000431803 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.36□□□□□ -0.91
CDC42-IT1-201ENST00000431803 WIPF1O43516 503 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms