RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 SLC13A1Q9BZW2 595 aa18.49■□□□□ 0.55
DDR1-236ENST00000431373 EIF2B3Q9NR50 452 aaKnown RBP18.49■□□□□ 0.55
DDR1-236ENST00000431373 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.49■□□□□ 0.55
DDR1-236ENST00000431373 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.49■□□□□ 0.55
DDR1-236ENST00000431373 APOBEC3BQ9UH17 382 aaKnown RBP18.49■□□□□ 0.55
DDR1-236ENST00000431373 PNMA8BQ9ULN7 279 aaPredicted RBP18.49■□□□□ 0.55
DDR1-236ENST00000431373 ARL5AQ9Y689 179 aa18.49■□□□□ 0.55
DDR1-236ENST00000431373 PCNX2A6NKB5 2137 aa18.49■□□□□ 0.55
DDR1-236ENST00000431373 COL5A1P20908 1838 aaPredicted RBP18.49■□□□□ 0.55
DDR1-236ENST00000431373 ARID1BQ8NFD5 2236 aaPredicted RBP18.48■□□□□ 0.55
DDR1-236ENST00000431373 FADS2P1A8MWK0 482 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 TNFRSF10CO14798 259 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 INPP4BO15327 924 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 STX7O15400 261 aaKnown RBP18.48■□□□□ 0.55
DDR1-236ENST00000431373 BUD23O43709 281 aaKnown RBP18.48■□□□□ 0.55
DDR1-236ENST00000431373 PPFIA2O75334 1257 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 GAS8O95995 478 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 DGKAP23743 735 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 VPS41P49754 854 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 SRP54P61011 504 aaKnown RBP18.48■□□□□ 0.55
DDR1-236ENST00000431373 PDE1BQ01064 536 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 CDH17Q12864 832 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 GPS1Q13098 491 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 PDPK2PQ6A1A2 396 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 HID1Q8IV36 788 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 RBFAQ8N0V3 343 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 TRAM1L1Q8N609 369 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 DNAAF3Q8N9W5 541 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 OR1E3Q8WZA6 343 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 COX14Q96I36 57 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 TBATAQ96M53 351 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 DDX47Q9H0S4 455 aaKnown RBP18.48■□□□□ 0.55
DDR1-236ENST00000431373 SLC32A1Q9H598 525 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 CAAP1Q9H8G2 361 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 FGF22Q9HCT0 170 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 BTBD3Q9Y2F9 522 aa18.48■□□□□ 0.55
DDR1-236ENST00000431373 PLXNB3Q9ULL4 1909 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.47■□□□□ 0.55
DDR1-236ENST00000431373 DCDC2BA2VCK2 349 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 ECEL1O95672 775 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 TNFP01375 233 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 TPH1P17752 444 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 SPAM1P38567 509 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 HK3P52790 923 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 KCTD19Q17RG1 926 aaPredicted RBP18.47■□□□□ 0.55
DDR1-236ENST00000431373 ZNF548Q8NEK5 533 aaPredicted RBP18.47■□□□□ 0.55
DDR1-236ENST00000431373 DEFB124Q8NES8 71 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 OR4K2Q8NGD2 314 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 RHBDD1Q8TEB9 315 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 PDXPQ96GD0 296 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 CAMK1GQ96NX5 476 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 FRMD8Q9BZ67 464 aaPredicted RBP18.47■□□□□ 0.55
DDR1-236ENST00000431373 TCEAL2Q9H3H9 227 aaPredicted RBP18.47■□□□□ 0.55
DDR1-236ENST00000431373 PIH1D1Q9NWS0 290 aaKnown RBP18.47■□□□□ 0.55
DDR1-236ENST00000431373 UCKL1Q9NWZ5 548 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 SPASTQ9UBP0 616 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 MOSPD1Q9UJG1 213 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 PCOLCE2Q9UKZ9 415 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 CNOT6Q9ULM6 557 aaKnown RBP18.47■□□□□ 0.55
DDR1-236ENST00000431373 NEU2Q9Y3R4 380 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 DGKBQ9Y6T7 804 aa18.47■□□□□ 0.55
DDR1-236ENST00000431373 PRSS38A1L453 326 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 CCDC188H7C350 402 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 AQP9O43315 295 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 CEACAM5P06731 702 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 GRIA1P42261 906 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 CDK16Q00536 496 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 SEPT6Q14141 434 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 PTPRCAPQ14761 206 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 POU6F1Q14863 301 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 PRRT3Q5FWE3 981 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 KCTD16Q68DU8 428 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 RD3Q7Z3Z2 195 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 TRIM74Q86UV6 250 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 SLC25A45Q8N413 288 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 DTX3LQ8TDB6 740 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 LMX1AQ8TE12 382 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 RUNDC3BQ96NL0 473 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 C19orf43Q9BQ61 176 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 LRRC61Q9BV99 259 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 CYP4F12Q9HCS2 524 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 IL26Q9NPH9 171 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 MRPL40Q9NQ50 206 aaKnown RBP18.46■□□□□ 0.55
DDR1-236ENST00000431373 CASS4Q9NQ75 786 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 PCYOX1Q9UHG3 505 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 KCTD3Q9Y597 815 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 CSNK1G3Q9Y6M4 447 aa18.46■□□□□ 0.55
DDR1-236ENST00000431373 ZFC3H1O60293 1989 aaKnown RBP18.46■□□□□ 0.55
DDR1-236ENST00000431373 CNOT1A5YKK6 2376 aaKnown RBP18.46■□□□□ 0.55
DDR1-236ENST00000431373 GLYATL1P3A0A0U1RQE8 302 aa18.45■□□□□ 0.54
DDR1-236ENST00000431373 NEMP2A6NFY4 417 aa18.45■□□□□ 0.54
DDR1-236ENST00000431373 LDB2O43679 373 aa18.45■□□□□ 0.54
DDR1-236ENST00000431373 CBFA2T3O75081 653 aa18.45■□□□□ 0.54
DDR1-236ENST00000431373 CTSEP14091 401 aa18.45■□□□□ 0.54
DDR1-236ENST00000431373 TPSB2P20231 275 aa18.45■□□□□ 0.54
DDR1-236ENST00000431373 NOVA1P51513 510 aaKnown RBP18.45■□□□□ 0.54
DDR1-236ENST00000431373 ZNF140P52738 457 aaPredicted RBP18.45■□□□□ 0.54
DDR1-236ENST00000431373 PPP1R7Q15435 360 aa18.45■□□□□ 0.54
DDR1-236ENST00000431373 TPSAB1Q15661 275 aa18.45■□□□□ 0.54
DDR1-236ENST00000431373 DOK6Q6PKX4 331 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms