RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 TEX28O15482 410 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 MAP3K7O43318 606 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 NDUFS3O75489 264 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 SRP72O76094 671 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 SIX3O95343 332 aaPredicted RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 PRAMEF12O95522 483 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 PKMP14618 531 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 TSPAN8P19075 237 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 TTPAP49638 278 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 CEACAM7Q14002 265 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 PTPRNQ16849 979 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 SPOUT1Q5T280 376 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 TXNDC8Q6A555 127 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 CLEC6AQ6EIG7 209 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 C8orf82Q6P1X6 216 aaPredicted RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 GAREM2Q75VX8 874 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 TMC8Q8IU68 726 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 CLYBLQ8N0X4 340 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 STAG3L4Q8TBR4 150 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 GRIN3AQ8TCU5 1115 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 CD200R1Q8TD46 325 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 PIH1D2Q8WWB5 315 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 FUBP1Q96AE4 644 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 VOPP1Q96AW1 172 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 C19orf60Q96EN9 201 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 SERPINI1Q99574 410 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 TTC1Q99614 292 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 GPR21Q99679 349 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 C19orf43Q9BQ61 176 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 P2RY12Q9H244 342 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 WDR41Q9HAD4 459 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 EFCAB1Q9HAE3 211 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 CARNS1A5YM72 827 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 STX16-NPEPL1H3BU86 382 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 PPP6CO00743 305 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 FBP2O00757 339 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 NRG2O14511 850 aaPredicted RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 GAPDHSO14556 408 aaPredicted RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 STX16O14662 325 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 UBDO15205 165 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 ECI2O75521 394 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 PGLSO95336 258 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 MT-CO1P00395 513 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 ALDOCP09972 364 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 LINC00271P0C7V0 271 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 CDH13P55290 713 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 WDR5P61964 334 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 AP1S1P61966 158 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 SLC7A9P82251 487 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 LRP8Q14114 963 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 PFKFB4Q16877 469 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 PABPC1LQ4VXU2 614 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 ATXN7L2Q5T6C5 722 aaPredicted RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 ITIH5Q86UX2 942 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 CPXM2Q8N436 756 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 NKAPQ8N5F7 415 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 PPFIBP2Q8ND30 876 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 DIS3LQ8TF46 1054 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 TMA16Q96EY4 203 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 NSUN5Q96P11 429 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 CDRT15Q96T59 188 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 ZBP1Q9H171 429 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 MAGEE1Q9HCI5 957 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 ZDHHC7Q9NXF8 308 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 ADAMTS6Q9UKP5 1117 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 FAM50BQ9Y247 325 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 FCF1Q9Y324 198 aaKnown RBP13.88□□□□□ -0.19
HOXC4-202ENST00000430889 FIS1Q9Y3D6 152 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 ZNF711Q9Y462 761 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 ASB3Q9Y575 518 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 DNAJC15Q9Y5T4 150 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 COMMD10Q9Y6G5 202 aa13.88□□□□□ -0.19
HOXC4-202ENST00000430889 PLXNB3Q9ULL4 1909 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 MTCL1Q9Y4B5 1905 aaKnown RBP13.87□□□□□ -0.19
HOXC4-202ENST00000430889 CDC7O00311 574 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 ACOT8O14734 319 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 SCAMP3O14828 347 aaKnown RBP13.87□□□□□ -0.19
HOXC4-202ENST00000430889 STX7O15400 261 aaKnown RBP13.87□□□□□ -0.19
HOXC4-202ENST00000430889 HTRA2O43464 458 aaPredicted RBP13.87□□□□□ -0.19
HOXC4-202ENST00000430889 OR1I1O60431 355 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 CLASP2O75122 1294 aaKnown RBP13.87□□□□□ -0.19
HOXC4-202ENST00000430889 XRCC1P18887 633 aaPredicted RBP13.87□□□□□ -0.19
HOXC4-202ENST00000430889 ITGB8P26012 769 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 CSNK1DP48730 415 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 ACADVLP49748 655 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 RHOAP61586 193 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 RAD51Q06609 339 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 CDC16Q13042 620 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 TSNQ15631 228 aaKnown RBP13.87□□□□□ -0.19
HOXC4-202ENST00000430889 CDKN3Q16667 212 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 TRIM68Q6AZZ1 485 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 IRGCQ6NXR0 463 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 HTR3DQ70Z44 454 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 MFN1Q8IWA4 741 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 APCDD1Q8J025 514 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 RYBPQ8N488 228 aaPredicted RBP13.87□□□□□ -0.19
HOXC4-202ENST00000430889 EFHBQ8N7U6 833 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 SLC26A7Q8TE54 656 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 ZNF483Q8TF39 744 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms