RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 CNTNAP2Q9UHC6 1331 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 TBX1O43435 398 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 RAB4AP20338 218 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 FAM189A2Q15884 450 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 MAPK14Q16539 360 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 ADGRG6Q86SQ4 1221 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 NINJ2Q9NZG7 142 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 ZNHIT2Q9UHR6 403 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 ADAM28Q9UKQ2 775 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
RIF1-204ENST00000430328 GNRH1P01148 92 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 IFNA4P05014 189 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 NELFEP18615 380 aaKnown RBP16.41■□□□□ 0.22
RIF1-204ENST00000430328 ZNF627Q7L945 461 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 ABCC2Q92887 1545 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 CITO14578 2027 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 TEX13CA0A0J9YWL9 993 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 NUDT7P0C024 238 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 PET100P0DJ07 73 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 SLC2A2P11168 524 aaPredicted RBP16.41■□□□□ 0.22
RIF1-204ENST00000430328 LAMP2P13473 410 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 MATKP42679 507 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 DCST1Q5T197 706 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 C6orf52Q5T4I8 152 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 METTL21CQ5VZV1 264 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 GPR139Q6DWJ6 353 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 ALG1LQ6GMV1 187 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 SYCE2Q6PIF2 218 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 SLC5A5Q92911 643 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 AP2M1Q96CW1 435 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 TMEM184CQ9NVA4 438 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 CYTH4Q9UIA0 394 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 SLC27A6Q9Y2P4 619 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 ERVK-24P63145 666 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 TLE2Q04725 743 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 PIWIL4Q7Z3Z4 852 aaKnown RBP16.41■□□□□ 0.22
RIF1-204ENST00000430328 BBS1Q8NFJ9 593 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 LENG9Q96B70 501 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 RCN3Q96D15 328 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 CNOT6Q9ULM6 557 aaKnown RBP16.41■□□□□ 0.22
RIF1-204ENST00000430328 KDM6AO15550 1401 aaPredicted RBP16.41■□□□□ 0.22
RIF1-204ENST00000430328 C2orf74A8MZ97 194 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 EML1O00423 815 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 TLX3O43711 291 aaPredicted RBP16.41■□□□□ 0.22
RIF1-204ENST00000430328 WFS1O76024 890 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 GSTT2P0CG29 244 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 NEPROQ6NW34 567 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 SCGB1C1Q8TD33 95 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 KAT2AQ92830 837 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 A8MX80 341 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 DDX3XO00571 662 aaKnown RBP eCLIP16.41■□□□□ 0.222e-13■■□□□ 11.4
RIF1-204ENST00000430328 PEX6Q13608 980 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 PGM2Q96G03 612 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 RAP2CQ9Y3L5 183 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 PTPN9P43378 593 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 LUMP51884 338 aaPredicted RBP16.41■□□□□ 0.22
RIF1-204ENST00000430328 OGFOD2Q6N063 350 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 ADAMTSL2Q86TH1 951 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 ADCY4Q8NFM4 1077 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 HELQQ8TDG4 1101 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 MTRRQ9UBK8 725 aa16.41■□□□□ 0.22
RIF1-204ENST00000430328 OR6C6A6NF89 314 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 RP2O75695 350 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 SLC20A2Q08357 652 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 XRRA1Q6P2D8 792 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 ETNPPLQ8TBG4 499 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 ACMSDQ8TDX5 336 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 ASB8Q9H765 288 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 CYP3A7-CYP3A51PA0A087WV96 503 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 CYP3A7P24462 503 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 UQCRC1P31930 480 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 COLEC12Q5KU26 742 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 CHSY3Q70JA7 882 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 OR10H4Q8NGA5 316 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 HMGXB4Q9UGU5 601 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 NINQ8N4C6 2090 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 M0QX08 132 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 CHADO15335 359 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 CABYRO75952 493 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 LINC00032P0C843 101 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 ZNF823P16415 610 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 RPS9P46781 194 aaKnown RBP16.4■□□□□ 0.22
RIF1-204ENST00000430328 PPP3CAQ08209 521 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 CRTC2Q53ET0 693 aaPredicted RBP16.4■□□□□ 0.22
RIF1-204ENST00000430328 CPTPQ5TA50 214 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 ZNF280DQ6N043 979 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 POMZP3Q6PJE2 187 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 CLIP4Q8N3C7 705 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 PTGR2Q8N8N7 351 aaPredicted RBP16.4■□□□□ 0.22
RIF1-204ENST00000430328 RAB2BQ8WUD1 216 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 NDUFAF4Q9P032 175 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 PAQR7Q86WK9 346 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 TIGD4Q8IY51 512 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 AUTS2Q8WXX7 1259 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 FCGR1BQ92637 280 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 NXF3Q9H4D5 531 aaKnown RBP16.4■□□□□ 0.22
RIF1-204ENST00000430328 TMLHEQ9NVH6 421 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 KCNE2Q9Y6J6 123 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 CLCN5P51795 746 aa16.4■□□□□ 0.22
RIF1-204ENST00000430328 ZNF135P52742 658 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms