RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RCBTB1Q8NDN9 531 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 SCAMP4Q969E2 229 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 COX14Q96I36 57 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 BTBD6Q96KE9 485 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 LYSMD1Q96S90 227 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 DDA1Q9BW61 102 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 KCNK4Q9NYG8 393 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 VPS18Q9P253 973 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 CD84Q9UIB8 345 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 LCMT1Q9UIC8 334 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 RPL26L1Q9UNX3 145 aaKnown RBP14.81□□□□□ -0.04
MSH5-208ENST00000429846 HEMK1Q9Y5R4 338 aaPredicted RBP14.81□□□□□ -0.04
MSH5-208ENST00000429846 MYO18BQ8IUG5 2567 aa14.81□□□□□ -0.04
MSH5-208ENST00000429846 PPM1DO15297 605 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 CCL4P13236 92 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 MX2P20592 715 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 CSTF2P33240 577 aaKnown RBP eCLIP14.8□□□□□ -0.04
MSH5-208ENST00000429846 PBX1P40424 430 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 SSR1P43307 286 aaKnown RBP14.8□□□□□ -0.04
MSH5-208ENST00000429846 ARSEP51690 589 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 RAB15P59190 212 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 ZBED6P86452 979 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 MMRN1Q13201 1228 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 DPYSL3Q14195 570 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 PDK2Q15119 407 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 PTPRRQ15256 657 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 CAVIN1Q6NZI2 390 aaKnown RBP14.8□□□□□ -0.04
MSH5-208ENST00000429846 ALKBH5Q6P6C2 394 aaKnown RBP14.8□□□□□ -0.04
MSH5-208ENST00000429846 VASH2Q86V25 355 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 MAP7D3Q8IWC1 876 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 SFRP1Q8N474 314 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 EXD3Q8N9H8 876 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 EXTL1Q92935 676 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 TSGA13Q96PP4 275 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 ASPSCR1Q9BZE9 553 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 FAM117AQ9C073 453 aa14.8□□□□□ -0.04
MSH5-208ENST00000429846 STN1Q9H668 368 aaKnown RBP14.8□□□□□ -0.04
MSH5-208ENST00000429846 TLN1Q9Y490 2541 aaKnown RBP14.8□□□□□ -0.04
MSH5-208ENST00000429846 A0A087X0T9 212 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 B4E171 279 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 DUX1O43812 170 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 CD48P09326 243 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 FAM228BP0C875 321 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 FGF3P11487 239 aaPredicted RBP14.79□□□□□ -0.04
MSH5-208ENST00000429846 SLC2A4P14672 509 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 CSF2RBP32927 897 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 TSPAN7P41732 249 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 DSC2Q02487 901 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 NFATC3Q12968 1075 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 ANKRD20A8PQ5CZ79 823 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 TMEM71Q6P5X7 295 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 RFLNAQ6ZTI6 216 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 PRICKLE2Q7Z3G6 844 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 TRIM74Q86UV6 250 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 OR10G6Q8NH81 332 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 ZNF564Q8TBZ8 553 aaPredicted RBP14.79□□□□□ -0.04
MSH5-208ENST00000429846 FAF2Q96CS3 445 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 HDAC11Q96DB2 347 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 AHCYL2Q96HN2 611 aaKnown RBP14.79□□□□□ -0.04
MSH5-208ENST00000429846 TEFMQ96QE5 360 aaKnown RBP14.79□□□□□ -0.04
MSH5-208ENST00000429846 SLC38A3Q99624 504 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 FUCA2Q9BTY2 467 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 ZMYND15Q9H091 742 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 CLMPQ9H6B4 373 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 RMI1Q9H9A7 625 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 STARD5Q9NSY2 213 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 RBM22Q9NW64 420 aaKnown RBP eCLIP14.79□□□□□ -0.042e-13■■■■■ 57.4
MSH5-208ENST00000429846 PDP2Q9P2J9 529 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 UVRAGQ9P2Y5 699 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 CAPN11Q9UMQ6 739 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 CHKBQ9Y259 395 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 TMEM98Q9Y2Y6 226 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 TTLL3Q9Y4R7 772 aa14.79□□□□□ -0.04
MSH5-208ENST00000429846 A0A0U1RQS6 177 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 DNAJC6O75061 913 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 KRT7P08729 469 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 FANCCQ00597 558 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 NFKBIBQ15653 356 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.78□□□□□ -0.04
MSH5-208ENST00000429846 HENMT1Q5T8I9 393 aaKnown RBP14.78□□□□□ -0.04
MSH5-208ENST00000429846 NKAIN2Q5VXU1 208 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 WDR74Q6RFH5 385 aaPredicted RBP14.78□□□□□ -0.04
MSH5-208ENST00000429846 MARK2Q7KZI7 788 aaKnown RBP14.78□□□□□ -0.04
MSH5-208ENST00000429846 AVL9Q8NBF6 648 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 KCTD6Q8NC69 237 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 LPCAT1Q8NF37 534 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 ARRDC2Q8TBH0 407 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 SLC37A2Q8TED4 501 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 ART4Q93070 314 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 HERPUD2Q9BSE4 406 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 RIOK2Q9BVS4 552 aaKnown RBP14.78□□□□□ -0.04
MSH5-208ENST00000429846 PCDH9Q9HC56 1237 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 SARS2Q9NP81 518 aaKnown RBP14.78□□□□□ -0.04
MSH5-208ENST00000429846 PKD2L2Q9NZM6 624 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 LUC7L2Q9Y383 392 aaKnown RBP14.78□□□□□ -0.04
MSH5-208ENST00000429846 PLEKHM1Q9Y4G2 1056 aa14.78□□□□□ -0.04
MSH5-208ENST00000429846 C1orf232A0A0U1RR37 186 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 RGSL1A5PLK6 1076 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 INPP4BO15327 924 aa14.77□□□□□ -0.05
MSH5-208ENST00000429846 PROSCO94903 275 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms