RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 RHOXF2BP0C7M4 288 aa15.06■□□□□ 0
VARS2-203ENST00000428017 MYCLP1P12525 358 aaPredicted RBP15.06■□□□□ 0
VARS2-203ENST00000428017 PAMP19021 973 aa15.06■□□□□ 0
VARS2-203ENST00000428017 ITGALP20701 1170 aa15.06■□□□□ 0
VARS2-203ENST00000428017 TUBB4BP68371 445 aa15.06■□□□□ 0
VARS2-203ENST00000428017 PRAMEP78395 509 aa15.06■□□□□ 0
VARS2-203ENST00000428017 CDK3Q00526 305 aa15.06■□□□□ 0
VARS2-203ENST00000428017 SPEM2Q0P670 501 aa15.06■□□□□ 0
VARS2-203ENST00000428017 HLTFQ14527 1009 aaKnown RBP eCLIP15.06■□□□□ 0
VARS2-203ENST00000428017 NFATC4Q14934 902 aa15.06■□□□□ 0
VARS2-203ENST00000428017 CHRNA6Q15825 494 aa15.06■□□□□ 0
VARS2-203ENST00000428017 PLA2G2CQ5R387 149 aa15.06■□□□□ 0
VARS2-203ENST00000428017 IL27RAQ6UWB1 636 aa15.06■□□□□ 0
VARS2-203ENST00000428017 CENPUQ71F23 418 aa15.06■□□□□ 0
VARS2-203ENST00000428017 GDAP1Q8TB36 358 aa15.06■□□□□ 0
VARS2-203ENST00000428017 DTX3LQ8TDB6 740 aa15.06■□□□□ 0
VARS2-203ENST00000428017 IFT81Q8WYA0 676 aa15.06■□□□□ 0
VARS2-203ENST00000428017 STAMBPL1Q96FJ0 436 aa15.06■□□□□ 0
VARS2-203ENST00000428017 HIC2Q96JB3 615 aa15.06■□□□□ 0
VARS2-203ENST00000428017 AGAP2Q99490 1192 aa15.06■□□□□ 0
VARS2-203ENST00000428017 RHOXF2Q9BQY4 288 aa15.06■□□□□ 0
VARS2-203ENST00000428017 KIFC1Q9BW19 673 aa15.06■□□□□ 0
VARS2-203ENST00000428017 TEX101Q9BY14 249 aa15.06■□□□□ 0
VARS2-203ENST00000428017 ZDHHC5Q9C0B5 715 aa15.06■□□□□ 0
VARS2-203ENST00000428017 SMOC1Q9H4F8 434 aa15.06■□□□□ 0
VARS2-203ENST00000428017 MRM3Q9HC36 420 aaKnown RBP15.06■□□□□ 0
VARS2-203ENST00000428017 GRHL1Q9NZI5 618 aa15.06■□□□□ 0
VARS2-203ENST00000428017 SOX13Q9UN79 622 aa15.06■□□□□ 0
VARS2-203ENST00000428017 CCL22O00626 93 aa15.05■□□□□ -0
VARS2-203ENST00000428017 FOXD2O60548 495 aaPredicted RBP15.05■□□□□ -0
VARS2-203ENST00000428017 SRP72O76094 671 aaKnown RBP15.05■□□□□ -0
VARS2-203ENST00000428017 SLC25A14O95258 325 aaPredicted RBP15.05■□□□□ -0
VARS2-203ENST00000428017 HOXC4P09017 264 aaPredicted RBP15.05■□□□□ -0
VARS2-203ENST00000428017 ZNF806P0C7X5 589 aa15.05■□□□□ -0
VARS2-203ENST00000428017 MC4RP32245 332 aa15.05■□□□□ -0
VARS2-203ENST00000428017 TRIM23P36406 574 aa15.05■□□□□ -0
VARS2-203ENST00000428017 MAGEA3P43357 314 aa15.05■□□□□ -0
VARS2-203ENST00000428017 NXPH1P58417 271 aa15.05■□□□□ -0
VARS2-203ENST00000428017 KIAA1024LP59773 190 aa15.05■□□□□ -0
VARS2-203ENST00000428017 DHX9Q08211 1270 aaKnown RBP15.05■□□□□ -0
VARS2-203ENST00000428017 GRIK2Q13002 908 aa15.05■□□□□ -0
VARS2-203ENST00000428017 KIF19Q2TAC6 998 aa15.05■□□□□ -0
VARS2-203ENST00000428017 ZRANB3Q5FWF4 1079 aa15.05■□□□□ -0
VARS2-203ENST00000428017 FNBP1LQ5T0N5 605 aa15.05■□□□□ -0
VARS2-203ENST00000428017 AFTPHQ6ULP2 937 aa15.05■□□□□ -0
VARS2-203ENST00000428017 KDM7AQ6ZMT4 941 aa15.05■□□□□ -0
VARS2-203ENST00000428017 PHYKPLQ8IUZ5 450 aa15.05■□□□□ -0
VARS2-203ENST00000428017 IFT20Q8IY31 132 aa15.05■□□□□ -0
VARS2-203ENST00000428017 MPP5Q8N3R9 675 aa15.05■□□□□ -0
VARS2-203ENST00000428017 OR6P1Q8NGX9 317 aa15.05■□□□□ -0
VARS2-203ENST00000428017 ZNF398Q8TD17 642 aa15.05■□□□□ -0
VARS2-203ENST00000428017 ART4Q93070 314 aa15.05■□□□□ -0
VARS2-203ENST00000428017 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.05■□□□□ -01e-7■■■■■ 35.3
VARS2-203ENST00000428017 FUBP1Q96AE4 644 aaKnown RBP15.05■□□□□ -0
VARS2-203ENST00000428017 LRRC39Q96DD0 335 aa15.05■□□□□ -0
VARS2-203ENST00000428017 CDKN2AIPNLQ96HQ2 116 aa15.05■□□□□ -0
VARS2-203ENST00000428017 WDR92Q96MX6 357 aa15.05■□□□□ -0
VARS2-203ENST00000428017 PHOX2BQ99453 314 aa15.05■□□□□ -0
VARS2-203ENST00000428017 NAT9Q9BTE0 207 aa15.05■□□□□ -0
VARS2-203ENST00000428017 GTPBP2Q9BX10 602 aaKnown RBP15.05■□□□□ -0
VARS2-203ENST00000428017 FAM129AQ9BZQ8 928 aa15.05■□□□□ -0
VARS2-203ENST00000428017 ASB8Q9H765 288 aa15.05■□□□□ -0
VARS2-203ENST00000428017 CAPN10Q9HC96 672 aa15.05■□□□□ -0
VARS2-203ENST00000428017 SEMA4GQ9NTN9 838 aa15.05■□□□□ -0
VARS2-203ENST00000428017 MTRF1LQ9UGC7 380 aaKnown RBP15.05■□□□□ -0
VARS2-203ENST00000428017 DMGDHQ9UI17 866 aaKnown RBP15.05■□□□□ -0
VARS2-203ENST00000428017 CRLS1Q9UJA2 301 aa15.05■□□□□ -0
VARS2-203ENST00000428017 RPS6KL1Q9Y6S9 549 aa15.05■□□□□ -0
VARS2-203ENST00000428017 THADAQ6YHU6 1953 aa15.05■□□□□ -0
VARS2-203ENST00000428017 ABCA7Q8IZY2 2146 aa15.05■□□□□ -0
VARS2-203ENST00000428017 SPTY2D1-AS1A0A0U1RR47 76 aa15.04■□□□□ -0
VARS2-203ENST00000428017 FAM237BA0A1B0GVD1 139 aa15.04■□□□□ -0
VARS2-203ENST00000428017 FADS2P1A8MWK0 482 aa15.04■□□□□ -0
VARS2-203ENST00000428017 H7C0S8 307 aa15.04■□□□□ -0
VARS2-203ENST00000428017 ARHGAP33O14559 1287 aa15.04■□□□□ -0
VARS2-203ENST00000428017 ASMTLO95671 621 aa15.04■□□□□ -0
VARS2-203ENST00000428017 POLBP06746 335 aa15.04■□□□□ -0
VARS2-203ENST00000428017 PGAM1P18669 254 aa15.04■□□□□ -0
VARS2-203ENST00000428017 IRX4P78413 519 aa15.04■□□□□ -0
VARS2-203ENST00000428017 CACNG1Q06432 222 aa15.04■□□□□ -0
VARS2-203ENST00000428017 PDIA2Q13087 525 aaKnown RBP15.04■□□□□ -0
VARS2-203ENST00000428017 CUL1Q13616 776 aa15.04■□□□□ -0
VARS2-203ENST00000428017 CSRP2Q16527 193 aa15.04■□□□□ -0
VARS2-203ENST00000428017 GPR33Q49SQ1 333 aa15.04■□□□□ -0
VARS2-203ENST00000428017 ATP13A5Q4VNC0 1218 aa15.04■□□□□ -0
VARS2-203ENST00000428017 TCEAL6Q6IPX3 200 aa15.04■□□□□ -0
VARS2-203ENST00000428017 DOK6Q6PKX4 331 aa15.04■□□□□ -0
VARS2-203ENST00000428017 ENPP7Q6UWV6 458 aa15.04■□□□□ -0
VARS2-203ENST00000428017 MACC1Q6ZN28 852 aa15.04■□□□□ -0
VARS2-203ENST00000428017 TAS2R42Q7RTR8 314 aa15.04■□□□□ -0
VARS2-203ENST00000428017 SNX20Q7Z614 316 aa15.04■□□□□ -0
VARS2-203ENST00000428017 PARGQ86W56 976 aa15.04■□□□□ -0
VARS2-203ENST00000428017 CCNJLQ8IV13 435 aa15.04■□□□□ -0
VARS2-203ENST00000428017 SLC22A18ASQ8N1D0 253 aa15.04■□□□□ -0
VARS2-203ENST00000428017 PELI3Q8N2H9 469 aa15.04■□□□□ -0
VARS2-203ENST00000428017 OXR1Q8N573 874 aa15.04■□□□□ -0
VARS2-203ENST00000428017 OTUD6BQ8N6M0 293 aa15.04■□□□□ -0
VARS2-203ENST00000428017 GPR161Q8N6U8 529 aaKnown RBP15.04■□□□□ -0
VARS2-203ENST00000428017 LRRN4CLQ8ND94 238 aa15.04■□□□□ -0
VARS2-203ENST00000428017 SEC14L1Q92503 715 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms