RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 FTCDO95954 541 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MT-CYBP00156 380 aaPredicted RBP9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MT-CO3P00414 261 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SOD1P00441 154 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 HOXC4P09017 264 aaPredicted RBP9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PIRTP0C851 137 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 NFKB1P19838 968 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CTNNA2P26232 953 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TEAD1P28347 426 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CD68P34810 354 aaPredicted RBP9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ATP5OP48047 213 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 POLD2P49005 469 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 DPTQ07507 201 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CYP4F3Q08477 520 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 WASHC5Q12768 1159 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 KIF5AQ12840 1032 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SLC14A2Q15849 920 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TEX44Q53QW1 395 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PERM1Q5SV97 790 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ALS2CLQ60I27 953 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ADAMTSL4Q6UY14 1074 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 BBS12Q6ZW61 710 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ZNF765Q7L2R6 523 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 LYSMD3Q7Z3D4 306 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PROSER1Q86XN7 944 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CBARPQ8N350 705 aaPredicted RBP9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 LRRC57Q8N9N7 239 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 FAM46DQ8NEK8 389 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CCL4L1Q8NHW4 92 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 KIAA1524Q8TCG1 905 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ALG3Q92685 438 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 HPS1Q92902 700 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TEKT5Q96M29 485 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TRIB3Q96RU7 358 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 LYSMD1Q96S90 227 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 FAM118BQ9BPY3 351 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 HERPUD2Q9BSE4 406 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 FRMD8Q9BZ67 464 aaPredicted RBP9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 OSBPL8Q9BZF1 889 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 C10orf88Q9H8K7 445 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 UBP1Q9NZI7 540 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PADI4Q9UM07 663 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SUFUQ9UMX1 484 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 USP24Q9UPU5 2620 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SHOC2Q9UQ13 582 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TMEM98Q9Y2Y6 226 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PCDHB1Q9Y5F3 818 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PCDHA3Q9Y5H8 950 aa9.18□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CACNA1BQ00975 2339 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 EME2A4GXA9 379 aaPredicted RBP9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SRRM3A6NNA2 597 aaPredicted RBP9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 HACD1B0YJ81 288 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ANKRD66B4E2M5 251 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 APOC4-APOC2K7ER74 178 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TAF4O00268 1085 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CSO75390 466 aaKnown RBP9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 NDST3O95803 873 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 APOC2P02655 101 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PTMAP06454 111 aaKnown RBP9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CEACAM5P06731 702 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PYGLP06737 847 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TNNT3P45378 269 aaPredicted RBP9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SPINT3P49223 89 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 WNT3AP56704 352 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RWDD2BP57060 319 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CDK18Q07002 472 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ILF3Q12906 894 aaKnown RBP eCLIP9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 NOMO1Q15155 1222 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 AADACL2Q6P093 401 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SLC30A9Q6PML9 568 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 LVRNQ6Q4G3 990 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 MARK2Q7KZI7 788 aaKnown RBP9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PEX26Q7Z412 305 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CDKL3Q8IVW4 592 aaPredicted RBP9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SFTPA2Q8IWL1 248 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 NRSN1Q8IZ57 195 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ZNF567Q8N184 647 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TXLNBQ8N3L3 684 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 DCBLD1Q8N8Z6 715 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ZNF511Q8NB15 262 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 IPMKQ8NFU5 416 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ACTL9Q8TC94 416 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CCHCR1Q8TD31 782 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 HTR3CQ8WXA8 447 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CCDC74AQ96AQ1 378 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 TADA1Q96BN2 335 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ZNF775Q96BV0 537 aaPredicted RBP9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 DEPDC7Q96QD5 511 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 OR2M4Q96R27 311 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 CCDC3Q9BQI4 270 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 GSDMCQ9BYG8 508 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ZFYVE1Q9HBF4 777 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PKD2L2Q9NZM6 624 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 FAM153AQ9UHL3 310 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RSPH14Q9UHP6 348 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 AMFRQ9UKV5 643 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 PACSIN2Q9UNF0 486 aaPredicted RBP9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 SLC17A4Q9Y2C5 497 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 RAXQ9Y2V3 346 aa9.17□□□□□ -0.94
RFX3-AS1-202ENST00000427722 ZNF711Q9Y462 761 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms