RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 MGAT4CQ9UBM8 478 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 DDX25Q9UHL0 483 aaKnown RBP5.21□□□□□ -1.58
LINC00458-202ENST00000427299 RASAL2Q9UJF2 1139 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 CRYL1Q9Y2S2 319 aa5.21□□□□□ -1.58
LINC00458-202ENST00000427299 GPR75-ASB3A0A0A6YYF3 556 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 GXYLT2A0PJZ3 443 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 FRMD3A2A2Y4 597 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 J3KTA2 159 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 EIF3DO15371 548 aaKnown RBP eCLIP5.2□□□□□ -1.58
LINC00458-202ENST00000427299 TBCAO75347 108 aaKnown RBP5.2□□□□□ -1.58
LINC00458-202ENST00000427299 AFPP02771 609 aaKnown RBP5.2□□□□□ -1.58
LINC00458-202ENST00000427299 SRGAP2BP0DMP2 458 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 FERP16591 822 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 GAP43P17677 238 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 HSPA9P38646 679 aaKnown RBP5.2□□□□□ -1.58
LINC00458-202ENST00000427299 PRKCIP41743 596 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 SLC1A4P43007 532 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 CDK7P50613 346 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 HSPA2P54652 639 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 MPP1Q00013 466 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 SLC14A1Q13336 389 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 RPS6KA1Q15418 735 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 TAF5Q15542 800 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 NAB2Q15742 525 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 ASTE1Q2TB18 679 aaPredicted RBP5.2□□□□□ -1.58
LINC00458-202ENST00000427299 TBC1D9BQ66K14 1250 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 RETSATQ6NUM9 610 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 C18orf65Q6ZTR6 163 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 CCDC91Q7Z6B0 441 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 CCDC50Q8IVM0 306 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 NRSN1Q8IZ57 195 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 CCDC89Q8N998 374 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 USP38Q8NB14 1042 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 CCDC26Q8TAB7 109 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 SCAMP5Q8TAC9 235 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 SPPL3Q8TCT6 385 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 ACTRT1Q8TDG2 376 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 GRAMD1AQ96CP6 724 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 ATP6V1G3Q96LB4 118 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 CCDC43Q96MW1 224 aaKnown RBP5.2□□□□□ -1.58
LINC00458-202ENST00000427299 INPP4AQ96PE3 977 aaPredicted RBP5.2□□□□□ -1.58
LINC00458-202ENST00000427299 PAAF1Q9BRP4 392 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 RTKNQ9BST9 563 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 NSRP1Q9H0G5 558 aaKnown RBP5.2□□□□□ -1.58
LINC00458-202ENST00000427299 ISCUQ9H1K1 167 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 VPS33BQ9H267 617 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 EPS8L2Q9H6S3 715 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 SEMA4BQ9NPR2 832 aaPredicted RBP5.2□□□□□ -1.58
LINC00458-202ENST00000427299 FAM114A2Q9NRY5 505 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 RASSF1Q9NS23 344 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 BLOC1S4Q9NUP1 217 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 PANK4Q9NVE7 773 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 AIPL1Q9NZN9 384 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 STEAP1Q9UHE8 339 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 FAM169AQ9Y6X4 670 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 SIP14410 1827 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 SCN4AP35499 1836 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 MYH9P35579 1960 aaKnown RBP5.2□□□□□ -1.58
LINC00458-202ENST00000427299 PFASO15067 1338 aa5.2□□□□□ -1.58
LINC00458-202ENST00000427299 A8MVJ9 347 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 CLIC1O00299 241 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 ZNF263O14978 683 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 ZBTB5O15062 677 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 ZSCAN9O15535 394 aaPredicted RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 PALMO75781 387 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 ACTL6BO94805 426 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 UFL1O94874 794 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 WDR47O94967 919 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 FAM107AO95990 144 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 T-ENOLP0DO92 83 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 GYS1P13807 737 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 CD19P15391 556 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 MUTP22033 750 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 NR2F2P24468 414 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 KLRK1P26718 216 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 RDXP35241 583 aaKnown RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 KLK7P49862 253 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 GTF2A1P52655 376 aaPredicted RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 ALDH18A1P54886 795 aaKnown RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 POLR2FP61218 127 aaKnown RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 GUCY2DQ02846 1103 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 GFPT1Q06210 699 aaPredicted RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 IFFO1Q0D2I5 559 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 MFSD13AQ14CX5 517 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 CDC37Q16543 378 aaPredicted RBP5.19□□□□□ -1.58
LINC00458-202ENST00000427299 NFIL3Q16649 462 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 EXOC3L4Q17RC7 722 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 AGBL2Q5U5Z8 902 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 FAM90A2PQ658T7 463 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 FAM180BQ6P0A1 224 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 MSANTD2Q6P1R3 559 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 CFAP161Q6P656 301 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 CLEC9AQ6UXN8 241 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 MOGAT3Q86VF5 341 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 GPBP1Q86WP2 473 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 CNPY4Q8N129 248 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 DYNLL2Q96FJ2 89 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 HIC2Q96JB3 615 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 CABS1Q96KC9 395 aa5.19□□□□□ -1.58
LINC00458-202ENST00000427299 ZIM3Q96PE6 472 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms