RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 SPATA16Q9BXB7 569 aa17.93■□□□□ 0.46
HERC3-205ENST00000426683 SUDS3Q9H7L9 328 aaPredicted RBP17.93■□□□□ 0.46
HERC3-205ENST00000426683 CARS2Q9HA77 564 aaKnown RBP17.93■□□□□ 0.46
HERC3-205ENST00000426683 BPIFA1Q9NP55 256 aa17.93■□□□□ 0.46
HERC3-205ENST00000426683 HACD3Q9P035 362 aa17.93■□□□□ 0.46
HERC3-205ENST00000426683 TMEM98Q9Y2Y6 226 aa17.93■□□□□ 0.46
HERC3-205ENST00000426683 PCDHGA1Q9Y5H4 931 aa17.93■□□□□ 0.46
HERC3-205ENST00000426683 HYAL3O43820 417 aaPredicted RBP17.92■□□□□ 0.46
HERC3-205ENST00000426683 KIF5CO60282 957 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 DKK1O94907 266 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 IFNB1P01574 187 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 MYF5P13349 255 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 BPIP17213 487 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 SPINK2P20155 84 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 HMGCLP35914 325 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 DCDC1P59894 354 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 CCNG2Q16589 344 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 RAB44Q7Z6P3 723 aaPredicted RBP17.92■□□□□ 0.46
HERC3-205ENST00000426683 GKN2Q86XP6 184 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 KLHDC8BQ8IXV7 354 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 TTC30BQ8N4P2 665 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 TAB3Q8N5C8 712 aaPredicted RBP17.92■□□□□ 0.46
HERC3-205ENST00000426683 FAM181AQ8N9Y4 354 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 PTCD2Q8WV60 388 aaKnown RBP17.92■□□□□ 0.46
HERC3-205ENST00000426683 LRRC45Q96CN5 670 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 COX14Q96I36 57 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 TBL1YQ9BQ87 522 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 CDH19Q9H159 772 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 NFKBIL1Q9UBC1 381 aaPredicted RBP17.92■□□□□ 0.46
HERC3-205ENST00000426683 ANGPTL2Q9UKU9 493 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 CNOT6Q9ULM6 557 aaKnown RBP17.92■□□□□ 0.46
HERC3-205ENST00000426683 SUFUQ9UMX1 484 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 WASF3Q9UPY6 502 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 SLC17A4Q9Y2C5 497 aa17.92■□□□□ 0.46
HERC3-205ENST00000426683 SPTBN2O15020 2390 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 USP27XA6NNY8 438 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 USP12O75317 370 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 RFPL3O75679 317 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 ASMTLO95671 621 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 FUCA1P04066 466 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 ATP1A1P05023 1023 aaKnown RBP17.91■□□□□ 0.46
HERC3-205ENST00000426683 CKMT1AP12532 417 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 ACP1P24666 158 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 MSNP26038 577 aaKnown RBP17.91■□□□□ 0.46
HERC3-205ENST00000426683 GNPDA1P46926 289 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 C6orf132Q5T0Z8 1188 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 SDR16C5Q8N3Y7 309 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 TRAM1L1Q8N609 369 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 ZSCAN5AQ9BUG6 496 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 TMEM168Q9H0V1 697 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 PYCARDQ9ULZ3 195 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 ZKSCAN5Q9Y2L8 839 aa17.91■□□□□ 0.46
HERC3-205ENST00000426683 LY6G6EA0A0G2JKS1 128 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 BUD23O43709 281 aaKnown RBP17.9■□□□□ 0.46
HERC3-205ENST00000426683 IVLP07476 585 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 ACTN2P35609 894 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 DUSP3P51452 185 aaPredicted RBP17.9■□□□□ 0.46
HERC3-205ENST00000426683 SHC2P98077 582 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 CCDC173Q0VFZ6 552 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 KCTD11Q693B1 232 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 DRICH1Q6PGQ1 229 aaPredicted RBP17.9■□□□□ 0.46
HERC3-205ENST00000426683 LVRNQ6Q4G3 990 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 DHRS13Q6UX07 377 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 MARK2Q7KZI7 788 aaKnown RBP17.9■□□□□ 0.46
HERC3-205ENST00000426683 TAF8Q7Z7C8 310 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 PRUNE1Q86TP1 453 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 PDCD7Q8N8D1 485 aaKnown RBP17.9■□□□□ 0.46
HERC3-205ENST00000426683 CCL4L1Q8NHW4 92 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 SCG3Q8WXD2 468 aaKnown RBP17.9■□□□□ 0.46
HERC3-205ENST00000426683 PBKQ96KB5 322 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 PLEKHG4BQ96PX9 1271 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 SCNM1Q9BWG6 230 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 BOCQ9BWV1 1114 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 EVA1BQ9NVM1 165 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 IL17CQ9P0M4 197 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 OAS3Q9Y6K5 1087 aaKnown RBP17.9■□□□□ 0.46
HERC3-205ENST00000426683 U3KQA8 63 aa17.9■□□□□ 0.46
HERC3-205ENST00000426683 TDRD6O60522 2096 aaKnown RBP17.9■□□□□ 0.46
HERC3-205ENST00000426683 PSMD3O43242 534 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 ETS1P14921 441 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 SPAM1P38567 509 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 ILKQ13418 452 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 NR0B2Q15466 257 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 PDPK2PQ6A1A2 396 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 DENND5AQ6IQ26 1287 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 RASGEF1CQ8N431 466 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 CCDC89Q8N998 374 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 GLMNQ92990 594 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 SCARF2Q96GP6 870 aaPredicted RBP17.89■□□□□ 0.45
HERC3-205ENST00000426683 LRRC40Q9H9A6 602 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 ETNK1Q9HBU6 452 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 ARNT2Q9HBZ2 717 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 TRNAU1APQ9NX07 287 aaKnown RBP17.89■□□□□ 0.45
HERC3-205ENST00000426683 NCKIPSDQ9NZQ3 722 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 SIRPGQ9P1W8 387 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 KLK13Q9UKR3 277 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 GPR34Q9UPC5 381 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 DRG1Q9Y295 367 aaKnown RBP17.89■□□□□ 0.45
HERC3-205ENST00000426683 PKP3Q9Y446 797 aa17.89■□□□□ 0.45
HERC3-205ENST00000426683 GPSM3Q9Y4H4 160 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms