RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 SCDO00767 359 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 KLK10O43240 276 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 TEX33O43247 280 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 RNASEH1O60930 286 aaKnown RBP6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 SRGAP2O75044 1071 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 CLDN11O75508 207 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 ENDOD1O94919 500 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 CCDC172P0C7W6 258 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 UNGP13051 313 aaPredicted RBP6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 GNSP15586 552 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 PDGFRAP16234 1089 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 TNFAIP3P21580 790 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 MMP8P22894 467 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 SDHAP31040 664 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 TRHRP34981 398 aaPredicted RBP6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 NUMBP49757 651 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 CDH4P55283 916 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 CLDN6P56747 220 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 NOMO3P69849 1222 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 ZBTB16Q05516 673 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 SULT2A1Q06520 285 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 GRIK2Q13002 908 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 SLC9A5Q14940 896 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 HNRNPA1L2Q32P51 320 aaKnown RBP6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 INAVAQ3KP66 663 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 C5orf22Q49AR2 442 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 ACCSLQ4AC99 568 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 WDR45BQ5MNZ6 344 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 TRIM72Q6ZMU5 477 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 ARCQ7LC44 396 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 FAM124AQ86V42 546 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 ZC3H18Q86VM9 953 aaKnown RBP6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 DHX40Q8IX18 779 aaKnown RBP6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 EMC1Q8N766 993 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 ZNF610Q8N9Z0 462 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 KDM1BQ8NB78 822 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 CLRN3Q8NCR9 226 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 CADM4Q8NFZ8 388 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 ABHD4Q8TB40 342 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 GANCQ8TET4 914 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 RXFP2Q8WXD0 754 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 AHCYL2Q96HN2 611 aaKnown RBP6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 CFAP57Q96MR6 1250 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 HAPLN3Q96S86 360 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 TBCBQ99426 244 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 FEM1AQ9BSK4 669 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 CD244Q9BZW8 370 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 ANLNQ9NQW6 1124 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 SEPT11Q9NVA2 429 aaKnown RBP6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 ARHGEF38Q9NXL2 777 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 ADAM22Q9P0K1 906 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 NCKAP1Q9Y2A7 1128 aa6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 USP9YO00507 2555 aaPredicted RBP6.3□□□□□ -1.4
NIF3L1-207ENST00000426253 KIAA1549LQ6ZVL6 1849 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 CEP192Q8TEP8 1941 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 EDDM13A0A1B0GTR0 161 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 TCRBV5S2A0A599 114 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 FAM90A27PA6NNH2 459 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 MEI4A8MW99 385 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 FLRT2O43155 660 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 TNFSF14O43557 240 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 BUB1BO60566 1050 aaPredicted RBP6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 CNTN5O94779 1100 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 SERPINC1P01008 464 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 IGLV3-19P01714 112 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 MPOP05164 745 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 CALB1P05937 261 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 KRT3P12035 628 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 FERP16591 822 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 SDC4P31431 198 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 SLC8A1P32418 973 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 ACSL1P33121 698 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 RFC1P35251 1148 aaPredicted RBP6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 NSFP46459 744 aaKnown RBP6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 KRT83P78385 493 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 PTP4A2Q12974 167 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 TARDBPQ13148 414 aaKnown RBP eCLIP6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 RTP5Q14D33 572 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 IQCB1Q15051 598 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 KLHL40Q2TBA0 621 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 TBC1D25Q3MII6 688 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 ARL13BQ3SXY8 428 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 CCDC14Q49A88 953 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 C9orf64Q5T6V5 341 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 DCAF12L1Q5VU92 463 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 OTUD1Q5VV17 481 aaPredicted RBP6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 CPZQ66K79 652 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 CXorf57Q6NSI4 855 aaKnown RBP6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 WDR59Q6PJI9 974 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 BNIPLQ7Z465 357 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 IRF2BP2Q7Z5L9 587 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 MILR1Q7Z6M3 343 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 CIR1Q86X95 450 aaPredicted RBP6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 CACUL1Q86Y37 369 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 PHF13Q86YI8 300 aaPredicted RBP6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 EXD3Q8N9H8 876 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 DNASE2BQ8WZ79 361 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 ALG14Q96F25 216 aa6.29□□□□□ -1.4
NIF3L1-207ENST00000426253 NAP1L5Q96NT1 182 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms