RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MYCLP1P12525 358 aaPredicted RBP24.33■■□□□ 1.49
VEGFA-209ENST00000425836 ADRA1DP25100 572 aa24.33■■□□□ 1.49
VEGFA-209ENST00000425836 HTR1BP28222 390 aa24.33■■□□□ 1.49
VEGFA-209ENST00000425836 TMPRSS15P98073 1019 aa24.33■■□□□ 1.49
VEGFA-209ENST00000425836 EIF2B5Q13144 721 aaKnown RBP24.33■■□□□ 1.49
VEGFA-209ENST00000425836 PARGQ86W56 976 aa24.33■■□□□ 1.49
VEGFA-209ENST00000425836 DTX3LQ8TDB6 740 aa24.33■■□□□ 1.49
VEGFA-209ENST00000425836 TRIM31Q9BZY9 425 aa24.33■■□□□ 1.49
VEGFA-209ENST00000425836 TMEM9BQ9NQ34 198 aa24.33■■□□□ 1.49
VEGFA-209ENST00000425836 PNMA8BQ9ULN7 279 aaPredicted RBP24.33■■□□□ 1.49
VEGFA-209ENST00000425836 HEATR9A2RTY3 570 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 TMEM202A6NGA9 273 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 EFCAB8A8MWE9 144 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 ESPNB1AK53 854 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 GAPDHSO14556 408 aaPredicted RBP24.33■■□□□ 1.48
VEGFA-209ENST00000425836 INPP4BO15327 924 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 AVILO75366 819 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 SHBQ15464 509 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 CHRNA6Q15825 494 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 ZNF542PQ5EBM4 170 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 ENPP7Q6UWV6 458 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 FAM151BQ6UXP7 276 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 MNS1Q8NEH6 495 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 STYXQ8WUJ0 223 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 HIC2Q96JB3 615 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 DNAJC1Q96KC8 554 aaKnown RBP24.33■■□□□ 1.48
VEGFA-209ENST00000425836 SERPINB12Q96P63 405 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 IL22Q9GZX6 179 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 CAAP1Q9H8G2 361 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 NLE1Q9NVX2 485 aaPredicted RBP24.33■■□□□ 1.48
VEGFA-209ENST00000425836 FKBPLQ9UIM3 349 aa24.33■■□□□ 1.48
VEGFA-209ENST00000425836 GLYATL1P3A0A0U1RQE8 302 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 A0A1B0GTQ1 180 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 CCDC78A2IDD5 438 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 DFNA5O60443 496 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 MLNP12872 115 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 PSMA3P25788 255 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 MGAT1P26572 445 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 RXRGP48443 463 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 CRADDP78560 199 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 LAMB3Q13751 1172 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 PCID2Q5JVF3 399 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 PDPK2PQ6A1A2 396 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 HOOK3Q86VS8 718 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 OXR1Q8N573 874 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 COX14Q96I36 57 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 WDR92Q96MX6 357 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 ERP44Q9BS26 406 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 XAB2Q9HCS7 855 aaKnown RBP24.32■■□□□ 1.48
VEGFA-209ENST00000425836 DNAAF2Q9NVR5 837 aaKnown RBP24.32■■□□□ 1.48
VEGFA-209ENST00000425836 DNAJC28Q9NX36 388 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 KLF15Q9UIH9 416 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 TCAF1Q9Y4C2 921 aa24.32■■□□□ 1.48
VEGFA-209ENST00000425836 RIF1Q5UIP0 2472 aaKnown RBP24.32■■□□□ 1.48
VEGFA-209ENST00000425836 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-209ENST00000425836 C4orf47A7E2U8 309 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 CCL22O00626 93 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 HADHAP40939 763 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 XIAPP98170 497 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 ATP13A5Q4VNC0 1218 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 TSTD2Q5T7W7 516 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 KCTD16Q68DU8 428 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 TRIM74Q86UV6 250 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 SNF8Q96H20 258 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 CHRAC1Q9NRG0 131 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 TMPRSS11EQ9UL52 423 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 SNX24Q9Y343 169 aa24.31■■□□□ 1.48
VEGFA-209ENST00000425836 CTAGE15A4D2H0 777 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 UGT1A9O60656 530 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 SEC31AO94979 1220 aaKnown RBP24.3■■□□□ 1.48
VEGFA-209ENST00000425836 CSF2P04141 144 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 CTAGE8P0CG41 777 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 UGT1A6P19224 532 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 UGT1A1P22309 533 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 UGT1A4P22310 534 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 KELP23276 732 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 UGT1A3P35503 534 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 UGT1A5P35504 534 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 RPL21P46778 160 aaKnown RBP24.3■■□□□ 1.48
VEGFA-209ENST00000425836 ARRB1P49407 418 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-209ENST00000425836 SKIDA1Q1XH10 827 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 STPG1Q5TH74 334 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 CTAGE6Q86UF2 777 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 CTAGE4Q8IX94 777 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 PPHLN1Q8NEY8 458 aaKnown RBP24.3■■□□□ 1.48
VEGFA-209ENST00000425836 OR56A4Q8NGH8 313 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 ZNF778Q96MU6 729 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 FRMD8Q9BZ67 464 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-209ENST00000425836 UGT1A7Q9HAW7 530 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 UGT1A10Q9HAW8 530 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 UGT1A8Q9HAW9 530 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 SYBUQ9NX95 663 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 APPL1Q9UKG1 709 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 RIMKLBQ9ULI2 386 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 LAMA1P25391 3075 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 PI4KAP42356 2102 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 WDR87Q6ZQQ6 2873 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 CACNA1EQ15878 2313 aa24.3■■□□□ 1.48
VEGFA-209ENST00000425836 CEACAM5P06731 702 aa24.29■■□□□ 1.48
VEGFA-209ENST00000425836 MAGEA3P43357 314 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms