RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 CTBSQ01459 385 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 HLTFQ14527 1009 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 DOK6Q6PKX4 331 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 QKIQ96PU8 341 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 FCRL5Q96RD9 977 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 DESI2Q9BSY9 194 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 ZFYVE1Q9HBF4 777 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 RALYQ9UKM9 306 aaKnown RBP18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 SHOC2Q9UQ13 582 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 EFR3BQ9Y2G0 817 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 SPO11Q9Y5K1 396 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 ENTPD2Q9Y5L3 495 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 LRP4O75096 1905 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 A0A1W2PQM1 296 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 HACD1B0YJ81 288 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 APOC4-APOC2K7ER74 178 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 AURKAO14965 403 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 BRINP1O60477 761 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 USP12O75317 370 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 NDST3O95803 873 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 APOC2P02655 101 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 RBL1P28749 1068 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 PTPN7P35236 360 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 WNT3AP56704 352 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 CCL7P80098 99 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 XRCC4Q13426 336 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 NOMO1Q15155 1222 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 PYCR3Q53H96 274 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 PID1Q7Z2X4 250 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 GPR26Q8NDV2 337 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 CCHCR1Q8TD31 782 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 HTR3CQ8WXA8 447 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 OXNAD1Q96HP4 312 aaPredicted RBP18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 OSBPL8Q9BZF1 889 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 DPEP2Q9H4A9 486 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 TAAR2Q9P1P5 351 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 FAM153AQ9UHL3 310 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 APPL1Q9UKG1 709 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 RNF215Q9Y6U7 377 aa18.22■□□□□ 0.51
SMARCAL1-205ENST00000425815 DSPP15924 2871 aaKnown RBP18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 ASXL3Q9C0F0 2248 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 CCDC66A2RUB6 948 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 B4DGG1 531 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 F5H423 210 aaPredicted RBP18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 MTSS1O43312 755 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 DNAJC6O75061 913 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 TCEA3O75764 348 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 ATP1A1P05023 1023 aaKnown RBP18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 MPOP05164 745 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 PYGLP06737 847 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 RWDD2BP57060 319 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 C14orf28Q4W4Y0 310 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 CERCAMQ5T4B2 595 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 RBM44Q6ZP01 1051 aaKnown RBP18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 KIAA1328Q86T90 577 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 ACTL9Q8TC94 416 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 ATXN7L3BQ96GX2 97 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 PRR11Q96HE9 360 aaPredicted RBP18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 MRGPRX2Q96LB1 330 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 VAT1Q99536 393 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 GORASP1Q9BQQ3 440 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 GSDMCQ9BYG8 508 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 PKD2L2Q9NZM6 624 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 KLHL8Q9P2G9 620 aaPredicted RBP18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 ZNF711Q9Y462 761 aa18.21■□□□□ 0.51
SMARCAL1-205ENST00000425815 A0A087WV48 116 aa18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 DDX3YO15523 660 aaKnown RBP18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 EPOP01588 193 aa18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 GLB1P16278 677 aa18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 MAZP56270 477 aaKnown RBP18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 OTUD4Q01804 1114 aaKnown RBP18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 ILF3Q12906 894 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 C19orf48Q6RUI8 117 aa18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 MARK2Q7KZI7 788 aaKnown RBP18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 OR6C4Q8NGE1 309 aa18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 ZDHHC1Q8WTX9 485 aa18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 HNRNPLLQ8WVV9 542 aaKnown RBP18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 FAM118BQ9BPY3 351 aa18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 LRRN3Q9H3W5 708 aa18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 LRIT1Q9P2V4 623 aa18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 PACSIN2Q9UNF0 486 aaPredicted RBP18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 COL27A1Q8IZC6 1860 aaPredicted RBP18.2■□□□□ 0.5
SMARCAL1-205ENST00000425815 MACROD2A1Z1Q3 448 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 PMS2P1A4D2B8 440 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 H7C0C1 242 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 B4GAT1O43505 415 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 ECEL1O95672 775 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 PNLIPP16233 465 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 BPIP17213 487 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 CHRNA4P43681 627 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 ATP5OP48047 213 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 LSSP48449 732 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 B4GALNT1Q00973 533 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 SIRPB2Q5JXA9 342 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 ZNF648Q5T619 568 aaPredicted RBP18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 SLC30A9Q6PML9 568 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 PKD1L2Q7Z442 2459 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 B3GNT8Q7Z7M8 397 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 NAGSQ8N159 534 aa18.19■□□□□ 0.5
SMARCAL1-205ENST00000425815 ARL14Q8N4G2 192 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 415.5 ms