RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 VPS18Q9P253 973 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PDP2Q9P2J9 529 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 VPS4AQ9UN37 437 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SIK3Q9Y2K2 1263 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PPIL1Q9Y3C6 166 aa12.19□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TCRBV5S1A1TA0A578 114 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TMEM191CA6NGB0 347 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 LGALS16A8MUM7 142 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SNX2O60749 519 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CTPS1P17812 591 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PCK1P35558 622 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 NFATC2Q13469 925 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MAP7Q14244 749 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PIGHQ14442 188 aaPredicted RBP12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KRT81Q14533 505 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 HADHQ16836 314 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CDKAL1Q5VV42 579 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KCTD16Q68DU8 428 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 IYDQ6PHW0 289 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 LYSMD3Q7Z3D4 306 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ARHGAP22Q7Z5H3 698 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TECPR1Q7Z6L1 1165 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RASGRP3Q8IV61 690 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ARHGAP12Q8IWW6 846 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CBARPQ8N350 705 aaPredicted RBP12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SFRP1Q8N474 314 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SLC37A2Q8TED4 501 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PATE1Q8WXA2 126 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 HSPH1Q92598 858 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SCARF2Q96GP6 870 aaPredicted RBP12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ERGIC2Q96RQ1 377 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MGME1Q9BQP7 344 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RAD18Q9NS91 495 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PKD2L2Q9NZM6 624 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 LIMA1Q9UHB6 759 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CD84Q9UIB8 345 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 G3BP2Q9UN86 482 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 DOCK4Q8N1I0 1966 aa12.18□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RGSL1A5PLK6 1076 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 NPIPB15A6NHN6 443 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TOX3O15405 576 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KATNA1O75449 491 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MAP3K6O95382 1288 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 VIPP01282 170 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 FTLP02792 175 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 GM2AP17900 193 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 AMPD1P23109 780 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 SSR1P43307 286 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RPL26P61254 145 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MYL5Q02045 173 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 IL11RAQ14626 422 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 IGFBP7Q16270 282 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ASIC2Q16515 512 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CA9Q16790 459 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 C4orf17Q53FE4 359 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ANKRD20A8PQ5CZ79 823 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 LRRC66Q68CR7 880 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CCDC70Q6NSX1 233 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 C6orf15Q6UXA7 325 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ARHGAP36Q6ZRI8 547 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MAP7D3Q8IWC1 876 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CCDC13Q8IYE1 715 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 STARD8Q92502 1023 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 STAMBPL1Q96FJ0 436 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MCCC1Q96RQ3 725 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CTRCQ99895 268 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ULBP3Q9BZM4 244 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 NAT10Q9H0A0 1025 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 FAM83DQ9H4H8 585 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 NT5MQ9NPB1 228 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PRDM8Q9NQV8 689 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MYO1AQ9UBC5 1043 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 KLHL3Q9UH77 587 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 AMACRQ9UHK6 382 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RPL26L1Q9UNX3 145 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 POLHQ9Y253 713 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TMEM184BQ9Y519 407 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RPS6KL1Q9Y6S9 549 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RP1P56715 2156 aa12.17□□□□□ -0.46
HLA-DQB3-203ENST00000425319 LOC101059948A0A1B0GTJ6 334 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TTC24A2A3L6 582 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 LRRC10BA6NIK2 292 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PRR19A6NJB7 356 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 EPHB6O15197 1021 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MAFKO60675 156 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MTA2O94776 668 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 FUCA1P04066 466 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 VCLP18206 1134 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CR2P20023 1033 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 DLSTP36957 453 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ZNF165P49910 485 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 MAXP61244 160 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 PDE1BQ01064 536 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 OGDHQ02218 1023 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TRAF2Q12933 501 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 TCTN3Q6NUS6 607 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ZNF653Q96CK0 615 aa12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 RIOK2Q9BVS4 552 aaKnown RBP12.16□□□□□ -0.46
HLA-DQB3-203ENST00000425319 ADGRE3Q9BY15 652 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms