RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SCRG1O75711 98 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 TIAF1O95411 115 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 ASMTLO95671 621 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 IGHEP01854 428 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 CEACAM5P06731 702 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 HOXC4P09017 264 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-203ENST00000424270 PYGMP11217 842 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 PDIA4P13667 645 aaKnown RBP6.26□□□□□ -1.41
SDCBP-203ENST00000424270 CA5AP35218 305 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 OTUD4Q01804 1114 aaKnown RBP6.26□□□□□ -1.41
SDCBP-203ENST00000424270 MYBPHQ13203 477 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 PRKD1Q15139 912 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-203ENST00000424270 UGP2Q16851 508 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 CRB2Q5IJ48 1285 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 DCAF10Q5QP82 559 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 TCERG1LQ5VWI1 586 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 RAET1GQ6H3X3 334 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 IGFL3Q6UXB1 125 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 UNC13DQ70J99 1090 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 PHLDB2Q86SQ0 1253 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 PACS2Q86VP3 889 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 GALNT13Q8IUC8 556 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 SLC9A9Q8IVB4 645 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 DEFB106AQ8N104 65 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 SFRP1Q8N474 314 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 NETO2Q8NC67 525 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 TFAP2BQ92481 460 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 SEMA4DQ92854 862 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 ARHGEF2Q92974 986 aaKnown RBP6.26□□□□□ -1.41
SDCBP-203ENST00000424270 NINJ1Q92982 152 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 CLIP3Q96DZ5 547 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 NUS1Q96E22 293 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 FAXDC2Q96IV6 333 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 EXOC2Q96KP1 924 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 TTYH3Q9C0H2 523 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 CHST8Q9H2A9 424 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 THAP9Q9H5L6 903 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 ZNF395Q9H8N7 513 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-203ENST00000424270 SARS2Q9NP81 518 aaKnown RBP6.26□□□□□ -1.41
SDCBP-203ENST00000424270 FBXO2Q9UK22 296 aaPredicted RBP6.26□□□□□ -1.41
SDCBP-203ENST00000424270 TCFL5Q9UL49 500 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 PADI2Q9Y2J8 665 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 ATP8A1Q9Y2Q0 1164 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 SRPRBQ9Y5M8 271 aaKnown RBP6.26□□□□□ -1.41
SDCBP-203ENST00000424270 CLIC4Q9Y696 253 aa6.26□□□□□ -1.41
SDCBP-203ENST00000424270 LRP4O75096 1905 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 FAM171A2A8MVW0 826 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 C9J4A7 227 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 E5RJQ4 531 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 TOX3O15405 576 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-203ENST00000424270 LDB2O43679 373 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 ZMPSTE24O75844 475 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 TMCC1O94876 653 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 UBXN7O94888 489 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 CALCAP01258 141 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 IGLV3-25P01717 112 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 UQCRHP07919 91 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 PAEPP09466 180 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 INHBBP09529 407 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 NR2F2P24468 414 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 DNASE1P24855 282 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 ACVRL1P37023 503 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 MMP12P39900 470 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 TSFMP43897 325 aaKnown RBP6.25□□□□□ -1.41
SDCBP-203ENST00000424270 GSDMDP57764 484 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 ACY1Q03154 408 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 KCNAB1Q14722 419 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 TLR1Q15399 786 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 TAF5Q15542 800 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 CNGA2Q16280 664 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 CYP2A13Q16696 494 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 DCAF17Q5H9S7 520 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-203ENST00000424270 C1orf220Q5T0J3 134 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-203ENST00000424270 IZUMO3Q5VZ72 239 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 CES4AQ5XG92 561 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 RWDD4Q6NW29 188 aaKnown RBP6.25□□□□□ -1.41
SDCBP-203ENST00000424270 BEND5Q7L4P6 421 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 CHST15Q7LFX5 561 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-203ENST00000424270 BRAPQ7Z569 592 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 ZBTB2Q8N680 514 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 AVL9Q8NBF6 648 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 ADAMTS17Q8TE56 1095 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 FNIP1Q8TF40 1166 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 COG1Q8WTW3 980 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 CA5BP1Q8WTZ4 195 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 ZDHHC12Q96GR4 267 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 C18orf12Q96KH6 178 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 SLX1AQ9BQ83 275 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 ZYG11BQ9C0D3 744 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 CUEDC2Q9H467 287 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 EPS8L2Q9H6S3 715 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 SYNCQ9H7C4 482 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 ZBTB20Q9HC78 741 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-203ENST00000424270 GPAMQ9HCL2 828 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 EXOC1Q9NV70 894 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 SEC14L3Q9UDX4 400 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 RPH3AQ9Y2J0 694 aaPredicted RBP6.25□□□□□ -1.41
SDCBP-203ENST00000424270 TMEM98Q9Y2Y6 226 aa6.25□□□□□ -1.41
SDCBP-203ENST00000424270 CSAG2Q9Y5P2 127 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms