RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ISCA2Q86U28 154 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 SLC22A9Q8IVM8 553 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 DCP1BQ8IZD4 617 aaKnown RBP16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 LINC01465Q8N7H1 131 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 PAPD5Q8NDF8 572 aaKnown RBP16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 EDEM1Q92611 657 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 NTAN1Q96AB6 310 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 NRBF2Q96F24 287 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 CCDC138Q96M89 665 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 MRM3Q9HC36 420 aaKnown RBP16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 C8orf4Q9NR00 106 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 SDR39U1Q9NRG7 319 aaPredicted RBP16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 KLK14Q9P0G3 267 aa16.63■□□□□ 0.25
NPC1L1-203ENST00000423141 H0YAE9 185 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 MAN1A2O60476 641 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 NPR3P17342 541 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 NFKBIAP25963 317 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 TUBA3CQ13748 450 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 ZNF846Q147U1 533 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 RPS6KA2Q15349 733 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 FBXO48Q5FWF7 155 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 BLOC1S3Q6QNY0 202 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 GPRIN1Q7Z2K8 1008 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 RYBPQ8N488 228 aaPredicted RBP16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 ZNF641Q96N77 438 aaPredicted RBP16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 MAF1Q9H063 256 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 ERAP1Q9NZ08 941 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 POLG2Q9UHN1 485 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 AAR2Q9Y312 384 aaKnown RBP16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 AP3B1O00203 1094 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 UPK1AO00322 258 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 CACNG3O60359 315 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 SLC26A2P50443 739 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 ECT2LQ008S8 904 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 CBX2Q14781 532 aaPredicted RBP16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 MEP1AQ16819 746 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 INAVAQ3KP66 663 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 PTRH1Q86Y79 214 aaKnown RBP16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 RIOX2Q8IUF8 465 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 SPATC1LQ9H0A9 340 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 KLHL25Q9H0H3 589 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 TKTL2Q9H0I9 626 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 AKIP1Q9NQ31 210 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 INTS7Q9NVH2 962 aaKnown RBP16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 GMIPQ9P107 970 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 PCDHGA8Q9Y5G5 932 aa16.62■□□□□ 0.25
NPC1L1-203ENST00000423141 MYL3P08590 195 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 IGFBP6P24592 240 aaPredicted RBP16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 GSTM2P28161 218 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 HOXA11P31270 313 aaPredicted RBP16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 HCAR3P49019 387 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 IST1P53990 364 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 HERVK_113P63132 956 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 PCSK7Q16549 785 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 INTS6LQ5JSJ4 861 aaKnown RBP16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 C6orf183Q5T699 404 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 ANKRD34AQ69YU3 496 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 KIAA0930Q6ICG6 404 aaPredicted RBP16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 PARP8Q8N3A8 854 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 APPL2Q8NEU8 664 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 L3HYPDHQ96EM0 354 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 SLC9A7Q96T83 725 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 TRMOQ9BU70 441 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 COLEC11Q9BWP8 271 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 ERVK-6Q9BXR3 956 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 POLE4Q9NR33 117 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 INMTO95050 263 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 APBA3O96018 575 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 ALPLP05186 524 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 USP17L7P0C7H9 530 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 ZNF286BP0CG31 522 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 DNAJB2P25686 324 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 ADRA1AP35348 466 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 OR4D2P58180 307 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 STK32CQ86UX6 486 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 CLEC4FQ8N1N0 589 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 PTGR2Q8N8N7 351 aaPredicted RBP16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 TMBIM1Q969X1 311 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 BDH2Q9BUT1 245 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 FSD1LQ9BXM9 530 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 TRIM54Q9BYV2 358 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 TOR3AQ9H497 397 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 ATP13A3Q9H7F0 1226 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 GLOD4Q9HC38 313 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 POLR3BQ9NW08 1133 aaPredicted RBP16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 MTRRQ9UBK8 725 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 POU2F3Q9UKI9 436 aa16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 FNDC1Q4ZHG4 1894 aaPredicted RBP16.61■□□□□ 0.25
NPC1L1-203ENST00000423141 AZIN1O14977 448 aa16.6■□□□□ 0.25
NPC1L1-203ENST00000423141 PAMP19021 973 aa16.6■□□□□ 0.25
NPC1L1-203ENST00000423141 AGXTP21549 392 aa16.6■□□□□ 0.25
NPC1L1-203ENST00000423141 ALDH3A2P51648 485 aa16.6■□□□□ 0.25
NPC1L1-203ENST00000423141 OCA2Q04671 838 aa16.6■□□□□ 0.25
NPC1L1-203ENST00000423141 CTF1Q16619 201 aa16.6■□□□□ 0.25
NPC1L1-203ENST00000423141 PHKG1Q16816 387 aa16.6■□□□□ 0.25
NPC1L1-203ENST00000423141 CTU2Q2VPK5 515 aaKnown RBP16.6■□□□□ 0.25
NPC1L1-203ENST00000423141 DEPDC1Q5TB30 811 aa16.6■□□□□ 0.25
NPC1L1-203ENST00000423141 THAP5Q7Z6K1 395 aa16.6■□□□□ 0.25
NPC1L1-203ENST00000423141 SLCO6A1Q86UG4 719 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms