RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 THAP6Q8TBB0 222 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 ST8SIA4Q92187 359 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 TAAR8Q969N4 342 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 GRAMD2BQ96HH9 432 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 C1QTNF5Q9BXJ0 243 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 PRKRIP1Q9H875 184 aaPredicted RBP3.87□□□□□ -1.79
LINC00397-201ENST00000422074 VEZTQ9HBM0 779 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 SLC6A13Q9NSD5 602 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 ABI3Q9P2A4 366 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 HAO1Q9UJM8 370 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 INTS6Q9UL03 887 aaKnown RBP3.87□□□□□ -1.79
LINC00397-201ENST00000422074 AAR2Q9Y312 384 aaKnown RBP3.87□□□□□ -1.79
LINC00397-201ENST00000422074 OR2W1Q9Y3N9 320 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 NOTCH3Q9UM47 2321 aa3.87□□□□□ -1.79
LINC00397-201ENST00000422074 NPHP1O15259 732 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 SPINT2O43291 252 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 ABCD3P28288 659 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 EPHA8P29322 1005 aaPredicted RBP3.86□□□□□ -1.79
LINC00397-201ENST00000422074 HOXC9P31274 260 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 GNL1P36915 607 aaPredicted RBP3.86□□□□□ -1.79
LINC00397-201ENST00000422074 PAFAH1B1P43034 410 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 HOXA1P49639 335 aaPredicted RBP3.86□□□□□ -1.79
LINC00397-201ENST00000422074 EIF3BP55884 814 aaKnown RBP3.86□□□□□ -1.79
LINC00397-201ENST00000422074 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
LINC00397-201ENST00000422074 FOXM1Q08050 763 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 TMEM95Q3KNT9 176 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 GPATCH4Q5T3I0 446 aaKnown RBP3.86□□□□□ -1.79
LINC00397-201ENST00000422074 ZNF852Q6ZMS4 543 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 SLC26A9Q7LBE3 791 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 SMAP1Q8IYB5 467 aaPredicted RBP3.86□□□□□ -1.79
LINC00397-201ENST00000422074 CPXCR1Q8N123 301 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 TSPYL6Q8N831 410 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 SLC24A4Q8NFF2 622 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 MYRIPQ8NFW9 859 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 PSPC1Q8WXF1 523 aaKnown RBP3.86□□□□□ -1.79
LINC00397-201ENST00000422074 FBXO17Q96EF6 278 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 KIF1BPQ96EK5 621 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 SAAL1Q96ER3 474 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 QRFPRQ96P65 431 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 ACOX2Q99424 681 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 PCYT2Q99447 389 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 TMEM47Q9BQJ4 181 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 CHMP4AQ9BY43 222 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 ACSS1Q9NUB1 689 aaPredicted RBP3.86□□□□□ -1.79
LINC00397-201ENST00000422074 TAAR2Q9P1P5 351 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 PADI3Q9ULW8 664 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 PTPRCP08575 1304 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 SNED1Q8TER0 1413 aa3.86□□□□□ -1.79
LINC00397-201ENST00000422074 KIAA1210Q9ULL0 1709 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 FAM237AA0A1B0GTK4 181 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 EDIL3O43854 480 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 FGF5P12034 268 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 GM2AP17900 193 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 PIP4K2AP48426 406 aaPredicted RBP3.85□□□□□ -1.79
LINC00397-201ENST00000422074 TUBP50607 506 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 TERF1P54274 439 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 COL28A1Q2UY09 1125 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 HSP90AB4PQ58FF6 505 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 FAM69AQ5T7M9 428 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 DPPA4Q7L190 304 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 WDSUB1Q8N9V3 476 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 KLHDC9Q8NEP7 349 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 TMEM255BQ8WV15 326 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 ZNF501Q96CX3 271 aaPredicted RBP3.85□□□□□ -1.79
LINC00397-201ENST00000422074 ORAI1Q96D31 301 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 ALG14Q96F25 216 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 SCRN2Q96FV2 425 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 NEURL2Q9BR09 285 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 STRA6Q9BX79 667 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 AGXT2Q9BYV1 514 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 RANBP17Q9H2T7 1088 aaKnown RBP3.85□□□□□ -1.79
LINC00397-201ENST00000422074 SEBOXQ9HB31 216 aaPredicted RBP3.85□□□□□ -1.79
LINC00397-201ENST00000422074 NAALADL1Q9UQQ1 740 aa3.85□□□□□ -1.79
LINC00397-201ENST00000422074 ZCWPW2A0A1B0GU75 182 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 A0A1W2PRG0 241 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 VCYO14598 125 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 ZNHIT1O43257 154 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 EGFP01133 1207 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 PYGLP06737 847 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 FAM106CPP0CH98 169 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 KRT10P13645 584 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 XBP1P17861 261 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 UGT1A1P22309 533 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 UBA7P41226 1012 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 APOBEC1P41238 236 aaKnown RBP3.84□□□□□ -1.79
LINC00397-201ENST00000422074 MAPK9P45984 424 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 VEGFCP49767 419 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 TAS2R38P59533 333 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 ISL1P61371 349 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 RPL24P83731 157 aaKnown RBP3.84□□□□□ -1.79
LINC00397-201ENST00000422074 RUNX1T1Q06455 604 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 NEXNQ0ZGT2 675 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 CXorf66Q5JRM2 361 aaPredicted RBP3.84□□□□□ -1.79
LINC00397-201ENST00000422074 DCST1Q5T197 706 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 PDSS1Q5T2R2 415 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 STXBP5Q5T5C0 1151 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 C18orf63Q68DL7 685 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 LCN10Q6JVE6 187 aa3.84□□□□□ -1.79
LINC00397-201ENST00000422074 FBXL22Q6P050 247 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms