RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 EIF1ADQ8N9N8 165 aaKnown RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 RHOJQ9H4E5 214 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 CCDC177Q9NQR7 707 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 PSMC3P17980 439 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 GBE1Q04446 702 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 NAA30Q147X3 362 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 DPYSL2Q16555 572 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 GPAT3Q53EU6 434 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 MSANTD2Q6P1R3 559 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 KDM7AQ6ZMT4 941 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 BNC2Q6ZN30 1099 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 PTGR2Q8N8N7 351 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 RXFP1Q9HBX9 757 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 ADPRHL2Q9NX46 363 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 VPS4AQ9UN37 437 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 INVSQ9Y283 1065 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 BACE2Q9Y5Z0 518 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 FFAR3O14843 346 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 GPR42O15529 346 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 SERPINI2O75830 405 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 SEC24DO94855 1032 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 SYPP08247 313 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 ITGA2BP08514 1039 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 UMPSP11172 480 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 LRPAP1P30533 357 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 HSD17B2P37059 387 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 SSR2P43308 183 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 LIPMQ5VYY2 423 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 AARSD1Q9BTE6 412 aaKnown RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 TMEM120AQ9BXJ8 343 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 STRADBQ9C0K7 418 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 PPIEQ9UNP9 301 aaKnown RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 H3BQF6 201 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 FCGR1AP12314 374 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 VARSP26640 1264 aaKnown RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 SERPINB10P48595 397 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 BIKQ13323 160 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 INTS11Q5TA45 600 aaKnown RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 TMEM110Q86TL2 294 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 FUKQ8N0W3 1084 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 SMG8Q8ND04 991 aaKnown RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 PIF1Q9H611 641 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 SEMA3GQ9NS98 782 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 RBM47A0AV96 593 aaKnown RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 NPC1O15118 1278 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 RPS21P63220 83 aaKnown RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 OCA2Q04671 838 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 ITIH4Q14624 930 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 RTL10Q7L3V2 364 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 CARS2Q9HA77 564 aaKnown RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 TRBV23OR9-2A0A075B6M9 112 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 TCRBV21S2A2A0A5A6 115 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 MT-CO1P00395 513 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 C8GP07360 202 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 CALB2P22676 271 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 MLLT3P42568 568 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-206ENST00000421141 LY6G5CQ5SRR4 150 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 SERPINA9Q86WD7 417 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 PCDH12Q9NPG4 1184 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 GDF3Q9NR23 364 aa10.7□□□□□ -0.7
PTCH1-206ENST00000421141 NPEPPSL1A6NEC2 478 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 ABHD2P08910 425 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 PFKLP17858 780 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 WDR5P61964 334 aaKnown RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 INCA1Q0VD86 236 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 SNX20Q7Z614 316 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 TRPC4APQ8TEL6 797 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 HLA-CQ95604 372 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 L2HGDHQ9H9P8 463 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 CCDC167Q9P0B6 97 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 CPED1A4D0V7 1026 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 PPEF2O14830 753 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 CTSAP10619 480 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 GJA8P48165 433 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 STXBP1P61764 594 aaKnown RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 PTP4A2Q12974 167 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 LRRC23Q53EV4 343 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 ALFQ53S48 1182 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 LRRC73Q5JTD7 316 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 UBXN11Q5T124 520 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 ZNF783Q6ZMS7 281 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 FAM129CQ86XR2 697 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 CEP295NLQ96MC4 621 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 POLR3BQ9NW08 1133 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 GTF2A1LQ9UNN4 478 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 ARFGEF1Q9Y6D6 1849 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 HEPACAM2A8MVW5 462 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 AGXTP21549 392 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 WLSQ5T9L3 541 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 FAM46DQ8NEK8 389 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 SPPL2AQ8TCT8 520 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 DTX3LQ8TDB6 740 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 C12orf66Q96MD2 445 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 CCT7Q99832 543 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 RETREG1Q9H6L5 497 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 RGPD3A6NKT7 1758 aaPredicted RBP10.69□□□□□ -0.7
PTCH1-206ENST00000421141 C15orf38-AP3S2A0A0A6YYH1 394 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 TGM5O43548 720 aa10.69□□□□□ -0.7
PTCH1-206ENST00000421141 CFHP08603 1231 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms