RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 NME1P15531 152 aaKnown RBP13.28□□□□□ -0.28
TMEM248-203ENST00000418375 JUNDP17535 347 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 RPL22P35268 128 aaKnown RBP13.28□□□□□ -0.28
TMEM248-203ENST00000418375 HMGCLP35914 325 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 COILP38432 576 aaPredicted RBP13.28□□□□□ -0.28
TMEM248-203ENST00000418375 PAFAH1B1P43034 410 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 FNTAP49354 379 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 BLKP51451 505 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 ETF1P62495 437 aaKnown RBP13.28□□□□□ -0.28
TMEM248-203ENST00000418375 PPARDQ03181 441 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 EIF2B5Q13144 721 aaKnown RBP13.28□□□□□ -0.28
TMEM248-203ENST00000418375 SEMA5AQ13591 1074 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 SHBQ15464 509 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 ZNF542PQ5EBM4 170 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 TPRG1LQ5T0D9 272 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 ZDHHC20Q5W0Z9 365 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 CCDC137Q6PK04 289 aaKnown RBP13.28□□□□□ -0.28
TMEM248-203ENST00000418375 ADAMTSL4Q6UY14 1074 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 CCNI2Q6ZMN8 369 aaPredicted RBP13.28□□□□□ -0.28
TMEM248-203ENST00000418375 PRUNE1Q86TP1 453 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 PELI3Q8N2H9 469 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 SAP25Q8TEE9 199 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 GRK7Q8WTQ7 553 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 FUBP1Q96AE4 644 aaKnown RBP13.28□□□□□ -0.28
TMEM248-203ENST00000418375 EID2BQ96D98 161 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 CAPZA3Q96KX2 299 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 WDR92Q96MX6 357 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 RIOK2Q9BVS4 552 aaKnown RBP13.28□□□□□ -0.28
TMEM248-203ENST00000418375 TEX101Q9BY14 249 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 SLC13A1Q9BZW2 595 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 TOR4AQ9NXH8 423 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 NFKBIL1Q9UBC1 381 aaPredicted RBP13.28□□□□□ -0.28
TMEM248-203ENST00000418375 RNF14Q9UBS8 474 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 KLQ9UEF7 1012 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 PKP3Q9Y446 797 aa13.28□□□□□ -0.28
TMEM248-203ENST00000418375 KNL1Q8NG31 2342 aa13.27□□□□□ -0.28
TMEM248-203ENST00000418375 AURKAO14965 403 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 SDC3O75056 442 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 PPFIA2O75334 1257 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 PIAS2O75928 621 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 RASGRP1O95267 797 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 CRTAMO95727 393 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 APRTP07741 180 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 BASP1P80723 227 aaKnown RBP13.27□□□□□ -0.29
TMEM248-203ENST00000418375 CDK3Q00526 305 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 PDE1BQ01064 536 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 BNIP3Q12983 259 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 OLIG2Q13516 323 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 TAF1AQ15573 450 aaPredicted RBP13.27□□□□□ -0.29
TMEM248-203ENST00000418375 HENMT1Q5T8I9 393 aaKnown RBP13.27□□□□□ -0.29
TMEM248-203ENST00000418375 ALS2CLQ60I27 953 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 DENND5AQ6IQ26 1287 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 TTC27Q6P3X3 843 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 PPP1R21Q6ZMI0 780 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 GATAD2AQ86YP4 633 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 CREG2Q8IUH2 290 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 PHACTR4Q8IZ21 702 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 TTC30BQ8N4P2 665 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 TRAM1L1Q8N609 369 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 DNAAF3Q8N9W5 541 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 GLIS1Q8NBF1 620 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 OR56A4Q8NGH8 313 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 BRSK1Q8TDC3 778 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 TBATAQ96M53 351 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 PLEKHG4BQ96PX9 1271 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 ZSCAN5AQ9BUG6 496 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 SPATA16Q9BXB7 569 aa13.27□□□□□ -0.29
TMEM248-203ENST00000418375 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.27□□□□□ -0.299e-12■■□□□ 11.9
TMEM248-203ENST00000418375 APOBEC3BQ9UH17 382 aaKnown RBP13.27□□□□□ -0.29
TMEM248-203ENST00000418375 CHD6Q8TD26 2715 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 NEMP2A6NFY4 417 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 HAX1O00165 279 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 TNFRSF10CO14798 259 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 STX7O15400 261 aaKnown RBP13.26□□□□□ -0.29
TMEM248-203ENST00000418375 ZZEF1O43149 2961 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 SUN1O94901 812 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 DKK1O94907 266 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 SOD1P00441 154 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 TNFP01375 233 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 KRT14P02533 472 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 BPIP17213 487 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 LPOP22079 712 aaPredicted RBP13.26□□□□□ -0.29
TMEM248-203ENST00000418375 DGKAP23743 735 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 SPAM1P38567 509 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 HK3P52790 923 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 SRP54P61011 504 aaKnown RBP13.26□□□□□ -0.29
TMEM248-203ENST00000418375 ALG11Q2TAA5 492 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 PDPK2PQ6A1A2 396 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 SYT10Q6XYQ8 523 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 TMPRSS7Q7RTY8 843 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 HID1Q8IV36 788 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 GPR26Q8NDV2 337 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 HIC2Q96JB3 615 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 AGAP2Q99490 1192 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 LGR4Q9BXB1 951 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 BPIFA1Q9NP55 256 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 EIF2B3Q9NR50 452 aaKnown RBP13.26□□□□□ -0.29
TMEM248-203ENST00000418375 IL17CQ9P0M4 197 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 SPASTQ9UBP0 616 aa13.26□□□□□ -0.29
TMEM248-203ENST00000418375 FTSJ1Q9UET6 329 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms