RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 IRAK3Q9Y616 596 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 LOC102724159A0A0B4J2E5 919 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 G3V2T6 193 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 CDK14O94921 469 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 EIF2B2P49770 351 aaKnown RBP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 ATP6V0D1P61421 351 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 PWP2Q15269 919 aaKnown RBP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 VITQ6UXI7 678 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 VANGL1Q8TAA9 524 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 NDRG1Q92597 394 aaKnown RBP11.19□□□□□ -0.62
PTCH1-205ENST00000418258 FUT8Q9BYC5 575 aa11.19□□□□□ -0.62
PTCH1-205ENST00000418258 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 AGLP35573 1532 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 CYP4B1P13584 511 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 RPL22P35268 128 aaKnown RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 LARS2Q15031 903 aaKnown RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 POLNQ7Z5Q5 900 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 FRMD6Q96NE9 622 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 NOL6Q9H6R4 1146 aaKnown RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 RAI2Q9Y5P3 530 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 BAZ2AQ9UIF9 1905 aaKnown RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ATP6AP2A0A1C7CYW4 349 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 RGSL1A5PLK6 1076 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 E9PAM4 449 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ATP6AP2O75787 350 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ERBB2P04626 1255 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 CTSOP43234 321 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 MYBPC3Q14896 1274 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 UGCGQ16739 394 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 FUT10Q6P4F1 479 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 GALNT18Q6P9A2 607 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ANKRD23Q86SG2 305 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 OR7A2PQ8NGA2 310 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 OR5B17Q8NGF7 314 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 FAM81AQ8TBF8 368 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 PNPT1Q8TCS8 783 aaKnown RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 BHLHE41Q9C0J9 482 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 KCTD5Q9NXV2 234 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 CYP3A7-CYP3A51PA0A087WV96 503 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 FAM86C2PA6NEL3 165 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 IQCF5A8MTL0 148 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 PTPN2P17706 415 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 CYP3A7P24462 503 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 CACNA2D1P54289 1103 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 TCAIMQ8N3R3 496 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 SLC4A11Q8NBS3 891 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 OR4K2Q8NGD2 314 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF398Q8TD17 642 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 EMID1Q96A84 441 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 BLOC1S4Q9NUP1 217 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 DNAJC11Q9NVH1 559 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 EVLQ9UI08 416 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF222Q9UK12 451 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ZFP37Q9Y6Q3 630 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 SCAMP1O15126 338 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ITGA2BP08514 1039 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ARFIP1P53367 373 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 SLC5A3P53794 718 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 RASGEF1AQ8N9B8 481 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 GLIS3Q8NEA6 775 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 CLHC1Q8NHS4 586 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF483Q8TF39 744 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 C1QTNF1Q9BXJ1 281 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ZDHHC4Q9NPG8 344 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 C3orf18Q9UK00 162 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 SPAM1P38567 509 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 SLC13A2Q13183 592 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 RFWD3Q6PCD5 774 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 SPESP1Q6UW49 350 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 RBM18Q96H35 190 aaKnown RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 MBOAT7Q96N66 472 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 MRIQ9BWK5 157 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 PLEKHA1Q9HB21 404 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 PXDNQ92626 1479 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 A0A087WXM4 84 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 CCDC182A6NF36 153 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ARL5CA6NH57 179 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 SNUPNO95149 360 aaKnown RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 WNT3AP56704 352 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 UBAP2LQ14157 1087 aaKnown RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 MED22Q15528 200 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 CADM2Q8N3J6 435 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 FBXO15Q8NCQ5 510 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 CCDC54Q8NEL0 328 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 PIH1D2Q8WWB5 315 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 SMPDL3BQ92485 455 aa11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ACE2Q9BYF1 805 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-205ENST00000418258 ASTN1O14525 1302 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 FAM237BA0A1B0GVD1 139 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 OR2AG2A6NM03 316 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 MDM4O15151 490 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 ZNF846Q147U1 533 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-205ENST00000418258 GALNTL5Q7Z4T8 443 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 C10orf107Q8IVU9 208 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 OR2L5Q8NG80 312 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 LCN9Q8WX39 176 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 AP3S1Q92572 193 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 B3GNT5Q9BYG0 378 aa11.17□□□□□ -0.62
PTCH1-205ENST00000418258 SAR1AQ9NR31 198 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms