RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 TNNT1P13805 278 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 CCKBRP32239 447 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 MLLT3P42568 568 aaPredicted RBP17.77■□□□□ 0.44
CPNE1-210ENST00000416778 CDKN2BP42772 138 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 SPINT3P49223 89 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 INHBCP55103 352 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 MAZP56270 477 aaKnown RBP17.77■□□□□ 0.44
CPNE1-210ENST00000416778 DOK6Q6PKX4 331 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 RAB11FIP2Q7L804 512 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 TMPRSS9Q7Z410 1059 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 ZNF438Q7Z4V0 828 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 CLEC14AQ86T13 490 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 TRIM74Q86UV6 250 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 NT5DC3Q86UY8 548 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 RFX6Q8HWS3 928 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 NAGSQ8N159 534 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 FBXO39Q8N4B4 442 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 TMEM74Q96NL1 305 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 AGAP3Q96P47 875 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 ADGRE3Q9BY15 652 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 CEP41Q9BYV8 373 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 TRIM5Q9C035 493 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 SLC25A51Q9H1U9 297 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 FAM83DQ9H4H8 585 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 SAE1Q9UBE0 346 aaPredicted RBP17.77■□□□□ 0.44
CPNE1-210ENST00000416778 KIF26BQ2KJY2 2108 aa17.77■□□□□ 0.43
CPNE1-210ENST00000416778 ARHGEF17Q96PE2 2063 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-210ENST00000416778 C1orf232A0A0U1RR37 186 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 PLD2O14939 933 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 PPM1DO15297 605 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 INPP4BO15327 924 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 UGT1A5P35504 534 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 NR2C2P49116 596 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 OR1D5P58170 312 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 EIF3IQ13347 325 aaKnown RBP17.76■□□□□ 0.43
CPNE1-210ENST00000416778 NR1D2Q14995 579 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 TEX44Q53QW1 395 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 SLC30A9Q6PML9 568 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 KDELC2Q7Z4H8 507 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 KCNE4Q8WWG9 221 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 PATE1Q8WXA2 126 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 STRADBQ9C0K7 418 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 EPB41L5Q9HCM4 733 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 PCDHA13Q9Y5I0 950 aa17.76■□□□□ 0.43
CPNE1-210ENST00000416778 PCYT1BQ9Y5K3 369 aaPredicted RBP17.76■□□□□ 0.43
CPNE1-210ENST00000416778 PPP1R12AO14974 1030 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-210ENST00000416778 KLK10O43240 276 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 DNAJC6O75061 913 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 ITGA2BP08514 1039 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 CD1CP29017 333 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 NOP2P46087 812 aaKnown RBP17.75■□□□□ 0.43
CPNE1-210ENST00000416778 DYNLT1P63172 113 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 ADCY2Q08462 1091 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 PEX6Q13608 980 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 HENMT1Q5T8I9 393 aaKnown RBP17.75■□□□□ 0.43
CPNE1-210ENST00000416778 ZNF574Q6ZN55 896 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-210ENST00000416778 USP53Q70EK8 1073 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 MARK2Q7KZI7 788 aaKnown RBP17.75■□□□□ 0.43
CPNE1-210ENST00000416778 GPR155Q7Z3F1 870 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 TMC3Q7Z5M5 1100 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 CCHCR1Q8TD31 782 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 TEKT5Q96M29 485 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 FCRL3Q96P31 734 aaPredicted RBP17.75■□□□□ 0.43
CPNE1-210ENST00000416778 GLOD4Q9HC38 313 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 MAGEE1Q9HCI5 957 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 TFR2Q9UP52 801 aa17.75■□□□□ 0.43
CPNE1-210ENST00000416778 OAS3Q9Y6K5 1087 aaKnown RBP17.75■□□□□ 0.43
CPNE1-210ENST00000416778 FASNP49327 2511 aaKnown RBP17.75■□□□□ 0.43
CPNE1-210ENST00000416778 RHPN2P1A8MT19 583 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 FADS2P1A8MWK0 482 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 SPOPO43791 374 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 CST8O60676 142 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 ASMTLO95671 621 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 ATP1A1P05023 1023 aaKnown RBP17.74■□□□□ 0.43
CPNE1-210ENST00000416778 ALDH4A1P30038 563 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 ACTR1BP42025 376 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 GPR3P46089 330 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 ACTR1AP61163 376 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 CDK18Q07002 472 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 SQSTM1Q13501 440 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 COL9A2Q14055 689 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-210ENST00000416778 TFDP2Q14188 446 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 GALNT3Q14435 633 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 PRKD1Q15139 912 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-210ENST00000416778 LLGL1Q15334 1064 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 ODF2Q5BJF6 829 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 SPOCD1Q6ZMY3 1216 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 BZW1Q7L1Q6 419 aaKnown RBP17.74■□□□□ 0.43
CPNE1-210ENST00000416778 LYSMD3Q7Z3D4 306 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 PIM3Q86V86 326 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 SLITRK4Q8IW52 837 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 CCDC170Q8IYT3 715 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 RCOR2Q8IZ40 523 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 SPATA22Q8NHS9 363 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 OR2M4Q96R27 311 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 UBL7Q96S82 380 aaPredicted RBP17.74■□□□□ 0.43
CPNE1-210ENST00000416778 SEMA6CQ9H3T2 930 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 GOLPH3Q9H4A6 298 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 ZFYVE1Q9HBF4 777 aa17.74■□□□□ 0.43
CPNE1-210ENST00000416778 PKD2L2Q9NZM6 624 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms