RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 MCOLN2Q8IZK6 566 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 ESX1Q8N693 406 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 NPWQ8N729 165 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 TEX19Q8NA77 164 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 CLEC18CQ8NCF0 446 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 ANKRD20A12PQ8NF67 263 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 SH3KBP1Q96B97 665 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 SCRN2Q96FV2 425 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 KCTD15Q96SI1 283 aaPredicted RBP9.97□□□□□ -0.81
MDC1-202ENST00000416571 ZWILCHQ9H900 591 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 FBXO8Q9NRD0 319 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 PARVAQ9NVD7 372 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 KLHL3Q9UH77 587 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 CD84Q9UIB8 345 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 KCTD3Q9Y597 815 aa9.97□□□□□ -0.81
MDC1-202ENST00000416571 NBASA2RRP1 2371 aa9.96□□□□□ -0.81
MDC1-202ENST00000416571 PGLSO95336 258 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 CTPS1P17812 591 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 ARL4AP40617 200 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 MAXP61244 160 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 OGDHQ02218 1023 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 TRAF2Q12933 501 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 NFATC2Q13469 925 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 KRT31Q15323 416 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 CRTC2Q53ET0 693 aaPredicted RBP9.96□□□□□ -0.82
MDC1-202ENST00000416571 PYCR3Q53H96 274 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 RALGPS1Q5JS13 557 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 ACAD10Q6JQN1 1059 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 ADAMTSL4Q6UY14 1074 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 CHST15Q7LFX5 561 aaPredicted RBP9.96□□□□□ -0.82
MDC1-202ENST00000416571 TIPARPQ7Z3E1 657 aaKnown RBP9.96□□□□□ -0.82
MDC1-202ENST00000416571 SLC9B2Q86UD5 537 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 TSPAN33Q86UF1 283 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 TRIM74Q86UV6 250 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 SFRP1Q8N474 314 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 FNIP1Q8TF40 1166 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 MIB2Q96AX9 1013 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 SCARF2Q96GP6 870 aaPredicted RBP9.96□□□□□ -0.82
MDC1-202ENST00000416571 NSMCE3Q96MG7 304 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.96□□□□□ -0.82
MDC1-202ENST00000416571 NUP62CLQ9H1M0 184 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 NOD2Q9HC29 1040 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 APMAPQ9HDC9 416 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 SARS2Q9NP81 518 aaKnown RBP9.96□□□□□ -0.82
MDC1-202ENST00000416571 PDP2Q9P2J9 529 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 CNOT8Q9UFF9 292 aaKnown RBP9.96□□□□□ -0.82
MDC1-202ENST00000416571 ZNHIT2Q9UHR6 403 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 TP53TG5Q9Y2B4 290 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 TMEM184BQ9Y519 407 aaPredicted RBP9.96□□□□□ -0.82
MDC1-202ENST00000416571 RPS6KL1Q9Y6S9 549 aa9.96□□□□□ -0.82
MDC1-202ENST00000416571 TMCO5BA8MYB1 307 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 H3BRJ5 948 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 INPP4BO15327 924 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 MTSS1O43312 755 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 VPS4BO75351 444 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 FERP16591 822 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 ZNF30P17039 623 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 TNFAIP3P21580 790 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 DLSTP36957 453 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 STAT5AP42229 794 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 MMP13P45452 471 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 HCAR3P49019 387 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 EPHB1P54762 984 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 EPHA4P54764 986 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 FOXM1Q08050 763 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 MAMLD1Q13495 774 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.95□□□□□ -0.82
MDC1-202ENST00000416571 ATP1A1-AS1Q5TC04 95 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 MARC1Q5VT66 337 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 LRRC66Q68CR7 880 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 TMCO3Q6UWJ1 677 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 TECPR1Q7Z6L1 1165 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 PLXDC1Q8IUK5 500 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 PSTKQ8IV42 348 aaKnown RBP9.95□□□□□ -0.82
MDC1-202ENST00000416571 CCDC13Q8IYE1 715 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 CBARPQ8N350 705 aaPredicted RBP9.95□□□□□ -0.82
MDC1-202ENST00000416571 ATPAF2Q8N5M1 289 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 AVL9Q8NBF6 648 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 EXD1Q8NHP7 514 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 ENOX1Q8TC92 643 aaKnown RBP9.95□□□□□ -0.82
MDC1-202ENST00000416571 SCAMP4Q969E2 229 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 PSMG3-AS1Q96PY0 264 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 MCCC1Q96RQ3 725 aaPredicted RBP9.95□□□□□ -0.82
MDC1-202ENST00000416571 PEBP4Q96S96 227 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 MGME1Q9BQP7 344 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 ULBP3Q9BZM4 244 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 SPRY4Q9C004 299 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 ABCG8Q9H221 673 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 EPB41L1Q9H4G0 881 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 CWC15Q9P013 229 aaKnown RBP9.95□□□□□ -0.82
MDC1-202ENST00000416571 VPS4AQ9UN37 437 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 POLHQ9Y253 713 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 SIK3Q9Y2K2 1263 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 MRPS18BQ9Y676 258 aaKnown RBP9.95□□□□□ -0.82
MDC1-202ENST00000416571 KCNMB2Q9Y691 235 aa9.95□□□□□ -0.82
MDC1-202ENST00000416571 ATMINO43313 823 aaPredicted RBP9.94□□□□□ -0.82
MDC1-202ENST00000416571 SNX2O60749 519 aa9.94□□□□□ -0.82
MDC1-202ENST00000416571 AGFG2O95081 481 aa9.94□□□□□ -0.82
MDC1-202ENST00000416571 DLGAP3O95886 979 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms