RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 GPBAR1Q8TDU6 330 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 PDCD6IPQ8WUM4 868 aaKnown RBP13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 PSKH2Q96QS6 385 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 CDH19Q9H159 772 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 CARS2Q9HA77 564 aaKnown RBP13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 LUC7LQ9NQ29 371 aaKnown RBP13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 ZNF71Q9NQZ8 489 aaPredicted RBP13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 ETNK2Q9NVF9 386 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 TMEM9Q9P0T7 183 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 TAAR2Q9P1P5 351 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 MAN2B2Q9Y2E5 1009 aa13.2□□□□□ -0.3
CTHRC1-202ENST00000415886 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 ZNF891A8MT65 544 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 DUX1O43812 170 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 RAD1O60671 282 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 FUCA1P04066 466 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 IL4RP24394 825 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 CSF2RBP32927 897 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 MAN1A1P33908 653 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 MMP13P45452 471 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 LIMK2P53671 638 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 ACOX1Q15067 660 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 SPA17Q15506 151 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 CLPPQ16740 277 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 TIGD7Q6NT04 549 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 PNCKQ6P2M8 343 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 SLC30A9Q6PML9 568 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 DPPA4Q7L190 304 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 TP53INP2Q8IXH6 220 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 AGBL5Q8NDL9 886 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 OR4D9Q8NGE8 314 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 C9orf43Q8TAL5 461 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 PTCD2Q8WV60 388 aaKnown RBP13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 ZNF830Q96NB3 372 aaPredicted RBP13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 DDA1Q9BW61 102 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 GSDMCQ9BYG8 508 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 OCIAD1Q9NX40 245 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 ANAPC2Q9UJX6 822 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 ST14Q9Y5Y6 855 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 COL12A1Q99715 3063 aa13.19□□□□□ -0.3
CTHRC1-202ENST00000415886 NKX2-8O15522 239 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 MAFKO60675 156 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 IPO7O95373 1038 aaKnown RBP13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 CD48P09326 243 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 PRKAR1AP10644 381 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 THRAP10827 490 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 MYCLP1P12525 358 aaPredicted RBP13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 TNNT1P13805 278 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 MX2P20592 715 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 CSTF2P33240 577 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 SLC1A1P43005 524 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 MAGEA1P43355 309 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 GNPDA1P46926 289 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 ILF3Q12906 894 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 TBX2Q13207 712 aaPredicted RBP13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 BIRC2Q13490 618 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 TRA2AQ13595 282 aaKnown RBP eCLIP13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 DPYSL3Q14195 570 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 FAM129CQ86XR2 697 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 NAGSQ8N159 534 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 CCNYQ8ND76 341 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 CCDC112Q8NEF3 446 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 ECHDC3Q96DC8 303 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 NSMCE3Q96MG7 304 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 CATSPER2Q96P56 530 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 ZNF670Q9BS34 389 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 SLC39A1Q9NY26 324 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 INTUQ9ULD6 942 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 NENFQ9UMX5 172 aa13.18□□□□□ -0.3
CTHRC1-202ENST00000415886 IGHV1OR21-1A0A087WYE8 117 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 LRRD1A4D1F6 860 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 EFCAB7A8K855 629 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 PDE2AO00408 941 aaPredicted RBP13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 PPM1DO15297 605 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 ZW10O43264 779 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 CEACAM5P06731 702 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 CES1P23141 567 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 KDELR1P24390 212 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 CYLC1P35663 651 aaPredicted RBP13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 GPR3P46089 330 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 TAS2R40P59535 323 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 IFI16Q16666 785 aaKnown RBP13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 RALGPS1Q5JS13 557 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 ANKS6Q68DC2 871 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 HEATR4Q86WZ0 1026 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 NRSN1Q8IZ57 195 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 FAM71BQ8TC56 605 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 NUS1Q96E22 293 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 SLC45A3Q96JT2 553 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 COQ10AQ96MF6 247 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 NUDCD1Q96RS6 583 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 ZMYND15Q9H091 742 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 NT5MQ9NPB1 228 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 PHPT1Q9NRX4 125 aaPredicted RBP13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 B4GALT6Q9UBX8 382 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 SUFUQ9UMX1 484 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 PLAAQ9Y263 795 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 TTLL3Q9Y4R7 772 aa13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 PCDHGC4Q9Y5F7 938 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms