RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 CHST15Q7LFX5 561 aaPredicted RBP9.84□□□□□ -0.83
SS18-203ENST00000415083 ZNF280BQ86YH2 543 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 TRPC4APQ8TEL6 797 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 SGCDQ92629 289 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 LRRC58Q96CX6 371 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 HSPBAP1Q96EW2 488 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 FAR2Q96K12 515 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 C1orf74Q96LT6 269 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 CRISPLD1Q9H336 500 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 PDFQ9HBH1 243 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 MID1IP1Q9NPA3 183 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 RGS18Q9NS28 235 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 TMEM248Q9NWD8 314 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 OAZ3Q9UMX2 235 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 GIT1Q9Y2X7 761 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 TRPV2Q9Y5S1 764 aa9.84□□□□□ -0.83
SS18-203ENST00000415083 TPST1O60507 370 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 ODC1P11926 461 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 RPL9P32969 192 aaKnown RBP9.83□□□□□ -0.84
SS18-203ENST00000415083 PMS2P3Q13401 168 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 SELPLGQ14242 412 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 CYBRD1Q53TN4 286 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 KLHL35Q6PF15 583 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 SCIMPQ6UWF3 145 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 CLYBLQ8N0X4 340 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 OR6P1Q8NGX9 317 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 ESAMQ96AP7 390 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 ROPN1LQ96C74 230 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 PABPC5Q96DU9 382 aaKnown RBP9.83□□□□□ -0.84
SS18-203ENST00000415083 NTN4Q9HB63 628 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 EML4Q9HC35 981 aaKnown RBP9.83□□□□□ -0.84
SS18-203ENST00000415083 PNPLA3Q9NST1 481 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 SQORQ9Y6N5 450 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 TRIM64BA6NI03 449 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 CDC7O00311 574 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 B4GAT1O43505 415 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 RSL1D1O76021 490 aaKnown RBP9.83□□□□□ -0.84
SS18-203ENST00000415083 TCF3P15923 654 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 PAMP19021 973 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 CA5AP35218 305 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 SLC12A2P55011 1212 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 TMED1Q13445 227 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 INTS11Q5TA45 600 aaKnown RBP9.83□□□□□ -0.84
SS18-203ENST00000415083 ANKRD34AQ69YU3 496 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 OVOS1Q6IE37 1185 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 TIGD7Q6NT04 549 aaPredicted RBP9.83□□□□□ -0.84
SS18-203ENST00000415083 CXCL17Q6UXB2 119 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 SYVN1Q86TM6 617 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 OFCC1Q8IZS5 231 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 DDI1Q8WTU0 396 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 FATE1Q969F0 183 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 ISOC1Q96CN7 298 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 B3GALT6Q96L58 329 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 PLEKHG4BQ96PX9 1271 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 TCF12Q99081 682 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 ACTL8Q9H568 366 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 INTS7Q9NVH2 962 aaKnown RBP9.83□□□□□ -0.84
SS18-203ENST00000415083 PADI3Q9ULW8 664 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 CLEC11AQ9Y240 323 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 MYRFQ9Y2G1 1151 aa9.83□□□□□ -0.84
SS18-203ENST00000415083 MAGED1Q9Y5V3 778 aaPredicted RBP9.83□□□□□ -0.84
SS18-203ENST00000415083 GPR39O43194 453 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 CLASP2O75122 1294 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 MATN4O95460 622 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 GFAPP14136 432 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 UFM1P61960 85 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 PRAMEP78395 509 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 XKR7Q5GH72 579 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 PAQR3Q6TCH7 311 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 USP51Q70EK9 711 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 RTN4RL1Q86UN2 441 aaPredicted RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 GPR180Q86V85 440 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 ERI1Q8IV48 349 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 SLC22A9Q8IVM8 553 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 GPR150Q8NGU9 434 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 CCDC126Q96EE4 140 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 DTNBP1Q96EV8 351 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 RMND5BQ96G75 393 aaPredicted RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 ACOX2Q99424 681 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 RPF2Q9H7B2 306 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 GMIPQ9P107 970 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 ZNF639Q9UID6 485 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 TLR6Q9Y2C9 796 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 A0A0D9SEW6 157 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 AZIN1O14977 448 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 CD3EAPO15446 510 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 GRIK1P39086 918 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 YAP1P46937 504 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 GSK3BP49841 420 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 ENTPD1P49961 510 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 CPT1AP50416 773 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 PLOD1Q02809 727 aaPredicted RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 MERTKQ12866 999 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 FXNQ16595 210 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 C18orf21Q32NC0 220 aaPredicted RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 SLC39A12Q504Y0 691 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 SPRYD7Q5W111 196 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 SERINC5Q86VE9 423 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 RYBPQ8N488 228 aaPredicted RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 MDGA1Q8NFP4 955 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms