RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 NEK10Q6ZWH5 1172 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 MON1BQ7L1V2 547 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 PATL1Q86TB9 770 aaKnown RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 PALB2Q86YC2 1186 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 GALNT13Q8IUC8 556 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 LRRC8AQ8IWT6 810 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 CEP57L1Q8IYX8 460 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 DCP1BQ8IZD4 617 aaKnown RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 CNTROBQ8N137 903 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 RBMXL3Q8N7X1 1067 aaKnown RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 TSPYL6Q8N831 410 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 SMRP1Q8NCR6 262 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 SETD9Q8NE22 299 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZMIZ2Q8NF64 920 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 ADAMTS14Q8WXS8 1223 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 RADILQ96JH8 1075 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 APOLD1Q96LR9 279 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 BPIFA3Q9BQP9 254 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 UTP14AQ9BVJ6 771 aaKnown RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 NPLQ9BXD5 320 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 NAT10Q9H0A0 1025 aaKnown RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 UNC45AQ9H3U1 944 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 CLSTN2Q9H4D0 955 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 ITM2CQ9NQX7 267 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 PLSCR4Q9NRQ2 329 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 HMG20BQ9P0W2 317 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 WDR35Q9P2L0 1181 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 PYCARDQ9ULZ3 195 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 GPR34Q9UPC5 381 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 MTMR6Q9Y217 621 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 CHD2O14647 1828 aaKnown RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 N4BP2Q86UW6 1770 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 ITSN1Q15811 1721 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 NRKQ7Z2Y5 1582 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 AK9Q5TCS8 1911 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 PHLPP2Q6ZVD8 1323 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 A0A096LPK6 155 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 GOLGA6L4A6NEF3 574 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 FAM25EA8MYX2 175 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 GOLGA6L19H0YKK7 550 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 RPS6KA5O75582 802 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 BAG2O95816 211 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 HOXB7P09629 217 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 CCDC175P0C221 793 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 SKILP12757 684 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 AMTP48728 403 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 TUBP50607 506 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 ARL4CP56559 192 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 TMPRSS3P57727 454 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 ADORA2A-AS1P86434 159 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 MECOMQ03112 1051 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 GOLGA8FQ08AF8 430 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 KRT32Q14532 448 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 HNF4GQ14541 408 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 IL13RA2Q14627 380 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 SHBQ15464 509 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 RPE65Q16518 533 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 TPD52L1Q16890 204 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 ADCK5Q3MIX3 580 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 ABRAXAS1Q6UWZ7 409 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 CCDC186Q7Z3E2 898 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 TMTC1Q8IUR5 882 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 IQUBQ8NA54 791 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 MSANTD4Q8NCY6 345 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 LINS1Q8NG48 757 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 OR4N2Q8NGD1 307 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 AFG1LQ8WV93 481 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 FAM210AQ96ND0 272 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 PAIP2Q9BPZ3 127 aaKnown RBP3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 GPATCH1Q9BRR8 931 aaKnown RBP3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 LLPHQ9BRT6 129 aaKnown RBP3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 UBXN6Q9BZV1 441 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 TNMDQ9H2S6 317 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 NOD2Q9HC29 1040 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 ABCF3Q9NUQ8 709 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 ANO10Q9NW15 660 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 HYPKQ9NX55 129 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 NLKQ9UBE8 527 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 CLIP2Q9UDT6 1046 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 CYP46A1Q9Y6A2 500 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 DIP2AQ14689 1571 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 SPATA31D1Q6ZQQ2 1576 aa3.8□□□□□ -1.8
HMGB3P23-201ENST00000414981 CRB1P82279 1406 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 POGZQ7Z3K3 1410 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 SBNO1A3KN83 1393 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 RFX7Q2KHR2 1363 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 CRYBG1Q9Y4K1 1723 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 H7C0S8 307 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 EIF3FO00303 357 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 PLOD2O00469 737 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 DKC1O60832 514 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 B3GALNT1O75752 331 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 PAPSS2O95340 614 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 CLDN7O95471 211 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 SERPINC1P01008 464 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 IL1AP01583 271 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 IVLP07476 585 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 DHRS4L1P0CG22 281 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 ATP6V1B1P15313 513 aa3.79□□□□□ -1.8
HMGB3P23-201ENST00000414981 GJB2P29033 226 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms