RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 P2RY2P41231 377 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 STARD6P59095 220 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 CNTN1Q12860 1018 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 STARD3Q14849 445 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 TEDDM1Q5T9Z0 273 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 CYS1Q717R9 158 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 NLRP9Q7RTR0 991 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 RASSF3Q86WH2 238 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 TMPRSS6Q8IU80 811 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 DENND6AQ8IWF6 608 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 CYP4X1Q8N118 509 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 KIF2BQ8N4N8 673 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 OR6P1Q8NGX9 317 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 OR2T3Q8NH03 318 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 TRABDQ9H4I3 376 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 LMAN1LQ9HAT1 526 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 IARS2Q9NSE4 1012 aaKnown RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 EURLQ9NYK6 297 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 FKBPLQ9UIM3 349 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 STK38LQ9Y2H1 464 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 ZNF106Q9H2Y7 1883 aaKnown RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 TRPM6Q9BX84 2022 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 CCDC162PA2VCL2 907 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 C1QTNF3-AMACRE9PGA6 284 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 STX7O15400 261 aaKnown RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 MMP12P39900 470 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 SKIV2L2P42285 1042 aaKnown RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 RPS14P62263 151 aaKnown RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 PRAMEP78395 509 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 MRPS35P82673 323 aaKnown RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 MGAT5Q09328 741 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 RALGDSQ12967 914 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 CTBP1Q13363 440 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 KLHL38Q2WGJ6 581 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 FBXL19Q6PCT2 694 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 TAOK1Q7L7X3 1001 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 TRMT11Q7Z4G4 463 aaKnown RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 LDB1Q86U70 411 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 LRRC6Q86X45 466 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 LMNTD2Q8IXW0 634 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 HCAR2Q8TDS4 363 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 DCAKDQ8WVC6 231 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 ITFG2Q969R8 447 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 RAB3IPQ96QF0 476 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 LTB4R2Q9NPC1 389 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 CD93Q9NPY3 652 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 PAPOLBQ9NRJ5 636 aaKnown RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 MARCH4Q9P2E8 410 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-202ENST00000414700 ARL2BPQ9Y2Y0 163 aa15.48■□□□□ 0.07
SHMT2-202ENST00000414700 A0A1W2PP55 124 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 KANSL1LA0AUZ9 987 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 FAM170BA6NMN3 283 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 TCEA3O75764 348 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 RPP40O75818 363 aaKnown RBP15.47■□□□□ 0.07
SHMT2-202ENST00000414700 GOT2P00505 430 aaKnown RBP15.47■□□□□ 0.07
SHMT2-202ENST00000414700 C1SP09871 688 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 XPAP23025 273 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-202ENST00000414700 ABCG1P45844 678 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 PIP5KL1Q5T9C9 394 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 PDPK2PQ6A1A2 396 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 ERN2Q76MJ5 926 aaKnown RBP15.47■□□□□ 0.07
SHMT2-202ENST00000414700 NDUFAF2Q8N183 169 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 ZFAND2BQ8WV99 257 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 SLC44A1Q8WWI5 657 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 PEX13Q92968 403 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 PBXIP1Q96AQ6 731 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 PPP1R16AQ96I34 528 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 FAM210AQ96ND0 272 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 CCDC77Q9BR77 488 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 DHRS4Q9BTZ2 278 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 WRAP53Q9BUR4 548 aaKnown RBP15.47■□□□□ 0.07
SHMT2-202ENST00000414700 MMP17Q9ULZ9 603 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 LRRC42Q9Y546 428 aa15.47■□□□□ 0.07
SHMT2-202ENST00000414700 GAPDHSO14556 408 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-202ENST00000414700 AREL1O15033 823 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 BPIP17213 487 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 PAMP19021 973 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 GNAZP19086 355 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 CDKN1CP49918 316 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-202ENST00000414700 PEX6Q13608 980 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 FRG1Q14331 258 aaKnown RBP15.46■□□□□ 0.07
SHMT2-202ENST00000414700 CRY1Q16526 586 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 TNFAIP8L3Q5GJ75 292 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 AGBL4Q5VU57 503 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 ZNF470Q6ECI4 717 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 HSD11B1LQ7Z5J1 315 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 DYRK4Q9NR20 520 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 CD84Q9UIB8 345 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 RIMKLBQ9ULI2 386 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 PKP3Q9Y446 797 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 VPS13AQ96RL7 3174 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 DPPA5A6NC42 116 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 SLC7A4O43246 635 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 RNASEH1O60930 286 aaKnown RBP15.46■□□□□ 0.07
SHMT2-202ENST00000414700 SMIM24O75264 130 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 PSMA3P25788 255 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 GABRB3P28472 473 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 VIPR1P32241 457 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 CA5AP35218 305 aa15.46■□□□□ 0.07
SHMT2-202ENST00000414700 SLC1A2P43004 574 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms