RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TBX2Q13207 712 aaPredicted RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 ZNF177Q13360 481 aaPredicted RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 TRIM14Q14142 442 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 EIF4HQ15056 248 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 SMTNL2Q2TAL5 461 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ARL13BQ3SXY8 428 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 POM121L1PQ3SYA9 428 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ACCSLQ4AC99 568 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 USP39Q53GS9 565 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 PPP6R3Q5H9R7 873 aaPredicted RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 KCNT1Q5JUK3 1230 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 MPP7Q5T2T1 576 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 TCEAL6Q6IPX3 200 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 PLEKHA7Q6IQ23 1121 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ALKBH5Q6P6C2 394 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 SLC23A3Q6PIS1 610 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 SARM1Q6SZW1 724 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 LINGO4Q6UY18 593 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ARCQ7LC44 396 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 SLFN11Q7Z7L1 901 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ZNF354CQ86Y25 554 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 TMPRSS6Q8IU80 811 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 TMEFF1Q8IYR6 380 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 KIAA2013Q8IYS2 634 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ARFGAP1Q8N6T3 406 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 SPC24Q8NBT2 197 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 OR8K1Q8NGG5 319 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 HSPH1Q92598 858 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 CENPIQ92674 756 aaPredicted RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 SYN2Q92777 582 aaPredicted RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 TCEAL3Q969E4 200 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 IQCDQ96DY2 449 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 VCPIP1Q96JH7 1222 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 MRGPRX1Q96LB2 322 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 HAPLN3Q96S86 360 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 PSMB7Q99436 277 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 FOXB1Q99853 325 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 FEM1AQ9BSK4 669 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 CNPY3Q9BT09 278 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 SNRNP25Q9BV90 132 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 ZYG11BQ9C0D3 744 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ISCUQ9H1K1 167 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 EPC1Q9H2F5 836 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ARRDC1-AS1Q9H2J1 176 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 DHX35Q9H5Z1 703 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 ZWILCHQ9H900 591 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 NHEJ1Q9H9Q4 299 aaPredicted RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 PRDM16Q9HAZ2 1276 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 CD248Q9HCU0 757 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 TNFRSF12AQ9NP84 129 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 PARD6AQ9NPB6 346 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 PRSS16Q9NQE7 514 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 KLHL11Q9NVR0 708 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ZNHIT6Q9NWK9 470 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 OR12D3Q9UGF7 316 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 PRSS50Q9UI38 385 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 SLC25A13Q9UJS0 675 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ANAPC7Q9UJX3 599 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 RAB23Q9ULC3 237 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 FZD10Q9ULW2 581 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 USP18Q9UMW8 372 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 NENFQ9UMX5 172 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 TFR2Q9UP52 801 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 PLA2G4CQ9UP65 541 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 NEU3Q9UQ49 428 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 MFHAS1Q9Y4C4 1052 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 PAXBP1Q9Y5B6 917 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 BZW2Q9Y6E2 419 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 SCINQ9Y6U3 715 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 OTOGLQ3ZCN5 2332 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 PI4KAP42356 2102 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 SPTBN4Q9H254 2564 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 GPR179Q6PRD1 2367 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 IGLV3-10A0A075B6K4 115 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 IGHV1OR15-9A0A0B4J2B8 117 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 CCDC154A6NI56 674 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 DRGXA6NNA5 263 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 PATE3B3GLJ2 98 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 H3BML4 177 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 RNF103O00237 685 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 EEF2KO00418 725 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 TIMM44O43615 452 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 PRPSAP2O60256 369 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 LRCH4O75427 683 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 RNF8O76064 485 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 PCDH8O95206 1070 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 MPIG6BO95866 241 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 PRNPP04156 253 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 MYBL1P10243 752 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 ACADMP11310 421 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 SRCP12931 536 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 TNNT1P13805 278 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 GOT1P17174 413 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 IL1R2P27930 398 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 EPHB2P29323 1055 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 SERPINB3P29508 390 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 OR1E1P30953 314 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 HOXA6P31267 233 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 HNRNPH3P31942 346 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 GDNFP39905 211 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms