RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 VPS35Q96QK1 796 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 LMF1Q96S06 567 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 MIPEPQ99797 713 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 RBM4BQ9BQ04 359 aaKnown RBP3.96□□□□□ -1.78
LINC01048-201ENST00000414480 KCNS3Q9BQ31 491 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 RBM4Q9BWF3 364 aaKnown RBP3.96□□□□□ -1.78
LINC01048-201ENST00000414480 B3GNT5Q9BYG0 378 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 MIS12Q9H081 205 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 VCXQ9H320 206 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 WDR26Q9H7D7 661 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 MVB12BQ9H7P6 319 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 UBE2ZQ9H832 354 aaPredicted RBP3.96□□□□□ -1.78
LINC01048-201ENST00000414480 LRRC40Q9H9A6 602 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 PCDH9Q9HC56 1237 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 SLC39A2Q9NP94 309 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 IL23AQ9NPF7 189 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 CRTAC1Q9NQ79 661 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 DMRT3Q9NQL9 472 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 CHRAC1Q9NRG0 131 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 PNO1Q9NRX1 252 aaKnown RBP3.96□□□□□ -1.78
LINC01048-201ENST00000414480 FBXO28Q9NVF7 368 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 INTS7Q9NVH2 962 aaKnown RBP3.96□□□□□ -1.78
LINC01048-201ENST00000414480 GID8Q9NWU2 228 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 FAM120CQ9NX05 1096 aaKnown RBP3.96□□□□□ -1.78
LINC01048-201ENST00000414480 SOHLH2Q9NX45 425 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 SYBUQ9NX95 663 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 CACNA2D2Q9NY47 1150 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 KLHL9Q9P2J3 617 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 PSMC3IPQ9P2W1 217 aaPredicted RBP3.96□□□□□ -1.78
LINC01048-201ENST00000414480 TNFRSF10DQ9UBN6 386 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 IPO11Q9UI26 975 aaKnown RBP3.96□□□□□ -1.78
LINC01048-201ENST00000414480 VPS51Q9UID3 782 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 TLR6Q9Y2C9 796 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 NFE2L3Q9Y4A8 694 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 PIAS3Q9Y6X2 628 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 TRIOO75962 3097 aa3.96□□□□□ -1.78
LINC01048-201ENST00000414480 MYH3P11055 1940 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 USP24Q9UPU5 2620 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 DOCK1Q14185 1865 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 KMT2EQ8IZD2 1858 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 A0A075B6Q4 140 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 TRBV23-1A0A0A0MS06 115 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 BLACEA4D250 179 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 OR6C70A6NIJ9 312 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 SLC15A5A6NIM6 579 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 ARGFXA6NJG6 315 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 ZSCAN5BA6NJL1 495 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 TMEM114B3SHH9 223 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 FAM47E-STBD1D6RA91 191 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 E9PI62 339 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 FAM227AF5H4B4 570 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 H3BS24 57 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 AGRPO00253 132 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 GIPC1O14908 333 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 DCLK1O15075 740 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 TO15178 435 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 NOS1APO75052 506 aaPredicted RBP3.95□□□□□ -1.78
LINC01048-201ENST00000414480 PSIP1O75475 530 aaKnown RBP3.95□□□□□ -1.78
LINC01048-201ENST00000414480 TOM1L1O75674 476 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 RBBP9O75884 186 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 LRIG2O94898 1065 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 KCNK5O95279 499 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 CLEC3BP05452 202 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 CALB1P05937 261 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 CA3P07451 260 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 MMP2P08253 660 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 ZCCHC18P0CG32 403 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 MCF2P10911 925 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 RXRAP19793 462 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 PTNP21246 168 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 PPP2R1AP30153 589 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 PHBP35232 272 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 SLC26A3P40879 764 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 GARSP41250 739 aaKnown RBP3.95□□□□□ -1.78
LINC01048-201ENST00000414480 ALDH9A1P49189 494 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 RAD23AP54725 363 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 P2RX3P56373 397 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 BPIFB4P59827 614 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 RAC3P60763 192 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 RAB4BP61018 213 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 PSMC5P62195 406 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 VAMP2P63027 116 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 NKX3-2P78367 333 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 PRAMEP78395 509 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 FOXO4P98177 505 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 OCRLQ01968 901 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 ZNF33BQ06732 778 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 FCHO2Q0JRZ9 810 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 NPRL3Q12980 569 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 FADDQ13158 208 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 MAMLD1Q13495 774 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 PTK6Q13882 451 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 CYTH1Q15438 398 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 CCDC142Q17RM4 750 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 RGS21Q2M5E4 152 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 ZACNQ401N2 412 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 NHSL2Q5HYW2 709 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 GLRA4Q5JXX5 417 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 ATAT1Q5SQI0 421 aa3.95□□□□□ -1.78
LINC01048-201ENST00000414480 PRAMEF19Q5SWL8 479 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms