RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 FCHO1O14526 889 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 KIAA0355O15063 1070 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 VILLO15195 856 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 BIRC5O15392 142 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 BUD23O43709 281 aaKnown RBP9.39□□□□□ -0.91
SNHG3-201ENST00000413987 IL18RAPO95256 599 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 C4BPAP04003 597 aaKnown RBP9.39□□□□□ -0.91
SNHG3-201ENST00000413987 RHOQP17081 205 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 KRT4P19013 534 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 TBXAS1P24557 533 aaPredicted RBP9.39□□□□□ -0.91
SNHG3-201ENST00000413987 PSMD7P51665 324 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 SLC12A1Q13621 1099 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 C1orf146Q5VVC0 180 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 KANK2Q63ZY3 851 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 TANGO2Q6ICL3 276 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 OR7E24Q6IFN5 339 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 NOTUMQ6P988 496 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 CHSY1Q86X52 802 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 FAM172AQ8WUF8 416 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 SLC20A1Q8WUM9 679 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 RAB7BQ96AH8 199 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 INTS12Q96CB8 462 aaKnown RBP9.39□□□□□ -0.91
SNHG3-201ENST00000413987 C19orf60Q96EN9 201 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 ZFRQ96KR1 1074 aaKnown RBP9.39□□□□□ -0.91
SNHG3-201ENST00000413987 BTBD9Q96Q07 612 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 PSKH2Q96QS6 385 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 COLEC11Q9BWP8 271 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 TMEM8AQ9HCN3 771 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 PLK2Q9NYY3 685 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 ZNF148Q9UQR1 794 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 TRAF6Q9Y4K3 522 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 A0A1W2PPC4 97 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 ARVCFO00192 962 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 ADAM20O43506 726 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 RECQL4O94761 1208 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 HLA-DRAP01903 254 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 ALBP02768 609 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 TPOP07202 933 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 SPATA31D3P0C874 917 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 VCLP18206 1134 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 ABCD3P28288 659 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 CCR1P32246 355 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 PHBP35232 272 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 CLCN4P51793 760 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 CDK18Q07002 472 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 PTP4A2Q12974 167 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 BTG3Q14201 252 aaPredicted RBP9.39□□□□□ -0.91
SNHG3-201ENST00000413987 LPIN1Q14693 890 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 SLC27A1Q6PCB7 646 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 C15orf39Q6ZRI6 1047 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 SPATA31D4Q6ZUB0 917 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 PXKQ7Z7A4 578 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 DHDDSQ86SQ9 333 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 SATL1Q86VE3 508 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 CROCCP3Q8IVE0 287 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 NKAIN4Q8IVV8 208 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 ULK2Q8IYT8 1036 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 ZNF321PQ8N8H1 164 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 SMYD1Q8NB12 490 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 RNF169Q8NCN4 708 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 FBXL13Q8NEE6 735 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 C18orf25Q96B23 403 aaPredicted RBP9.39□□□□□ -0.91
SNHG3-201ENST00000413987 SGK3Q96BR1 496 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 MTBPQ96DY7 904 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 KREMEN1Q96MU8 473 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 Q9H521 79 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 RPF1Q9H9Y2 349 aaKnown RBP9.39□□□□□ -0.91
SNHG3-201ENST00000413987 KCNK13Q9HB14 408 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 GOLGA2P5Q9HBQ8 144 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 APOBEC3GQ9HC16 384 aaKnown RBP9.39□□□□□ -0.91
SNHG3-201ENST00000413987 S100A14Q9HCY8 104 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 RAB20Q9NX57 234 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 OGDHLQ9ULD0 1010 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 PADI3Q9ULW8 664 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 NAALAD2Q9Y3Q0 740 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 NUMBLQ9Y6R0 609 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 CHD7Q9P2D1 2997 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 OR6C74A6NCV1 312 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 H3BNC9 293 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 DNALI1O14645 258 aaPredicted RBP9.38□□□□□ -0.91
SNHG3-201ENST00000413987 PPEF2O14830 753 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 ALOX15BO15296 676 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 PEX1O43933 1283 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 CABYRO75952 493 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 KRT19P08727 400 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 MCF2P10911 925 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 GALP22466 123 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 IGFBP6P24592 240 aaPredicted RBP9.38□□□□□ -0.91
SNHG3-201ENST00000413987 ARL3P36405 182 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 MYL6P60660 151 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 OVGP1Q12889 678 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 PDK3Q15120 406 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 POU4F3Q15319 338 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 ANKRD20A4Q4UJ75 823 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 EFHC2Q5JST6 749 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 SCARA5Q6ZMJ2 495 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 GSTA5Q7RTV2 222 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 PRUNE1Q86TP1 453 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms