RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 REXO2Q9Y3B8 237 aaKnown RBP6.36□□□□□ -1.39
USP54-202ENST00000413442 PKP3Q9Y446 797 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 TTLL3Q9Y4R7 772 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 OR1A2Q9Y585 309 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 PCDHGA8Q9Y5G5 932 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 DUSP10Q9Y6W6 482 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 LRP4O75096 1905 aa6.36□□□□□ -1.39
USP54-202ENST00000413442 MYLKQ15746 1914 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 KIR2DS5A0A0G2JLQ3 304 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 A0A0G2JNG1 304 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 RCCD1A6NED2 376 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 TRABD2BA6NFA1 517 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 TMEM202A6NGA9 273 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 KIR2DS3K7RE56 304 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 QSOX1O00391 747 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 CHUKO15111 745 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 KMOO15229 486 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 NUAK1O60285 661 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 SDC3O75056 442 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 SLC25A14O95258 325 aaPredicted RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 CAPNS1P04632 268 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 CTPS1P17812 591 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 LPOP22079 712 aaPredicted RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 RBL1P28749 1068 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 PPARGP37231 505 aaPredicted RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 FDFT1P37268 417 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 ETV3P41162 512 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 FASLGP48023 281 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 LSSP48449 732 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 WNT3AP56704 352 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 GPLD1P80108 840 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 CDK16Q00536 496 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 INSM1Q01101 510 aaPredicted RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 IL9RQ01113 521 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 OTUD4Q01804 1114 aaKnown RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 ZBTB17Q13105 803 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 KLF1Q13351 362 aaPredicted RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 TRA2AQ13595 282 aaKnown RBP eCLIP6.35□□□□□ -1.39
USP54-202ENST00000413442 KIR2DS5Q14953 304 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 NR1D2Q14995 579 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 TAF1AQ15573 450 aaPredicted RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 ST3GAL2Q16842 350 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 C14orf28Q4W4Y0 310 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 PYCR3Q53H96 274 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 MEI1Q5TIA1 1274 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 KDELC1Q6UW63 502 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 DHRS13Q6UX07 377 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 WASH2PQ6VEQ5 465 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 RBM44Q6ZP01 1051 aaKnown RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 NLRP9Q7RTR0 991 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 LYSMD3Q7Z3D4 306 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 RD3Q7Z3Z2 195 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 GALNT13Q8IUC8 556 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 PHYKPLQ8IUZ5 450 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 PNPLA1Q8N8W4 532 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 SPC24Q8NBT2 197 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 NETO2Q8NC67 525 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 PLA2G15Q8NCC3 412 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 FAM46DQ8NEK8 389 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 SLC35B2Q8TB61 432 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 IFI44Q8TCB0 444 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 MAPK15Q8TD08 544 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 TSACCQ96A04 125 aaPredicted RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 RTP4Q96DX8 246 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 SPATA13Q96N96 652 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 TTC25Q96NG3 672 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 CNTNAP3BQ96NU0 1288 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 TTC1Q99614 292 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 HERPUD2Q9BSE4 406 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 RIOK2Q9BVS4 552 aaKnown RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 HEMGNQ9BXL5 484 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 CNTNAP3Q9BZ76 1288 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 STRADBQ9C0K7 418 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 CLPBQ9H078 707 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 GBA3Q9H227 469 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 DPEP2Q9H4A9 486 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 UCK1Q9HA47 277 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 CYP4F12Q9HCS2 524 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 WASH6PQ9NQA3 447 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 IL17CQ9P0M4 197 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 SEPT10Q9P0V9 454 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 RSPH14Q9UHP6 348 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 KLF15Q9UIH9 416 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 KLK13Q9UKR3 277 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 RIMKLBQ9ULI2 386 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 COQ6Q9Y2Z9 468 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 ZNF711Q9Y462 761 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 JRKLQ9Y4A0 524 aa6.35□□□□□ -1.39
USP54-202ENST00000413442 ZFC3H1O60293 1989 aaKnown RBP6.35□□□□□ -1.39
USP54-202ENST00000413442 C17orf113A0A1B0GUU1 675 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 MACROD2A1Z1Q3 448 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 TTC24A2A3L6 582 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 CPED1A4D0V7 1026 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 GOLGA6L3A6NEY3 463 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 AGAP14A8MT82 685 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 A8MX80 341 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 H7C0S8 307 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 NTN3O00634 580 aaPredicted RBP6.34□□□□□ -1.39
USP54-202ENST00000413442 CES2O00748 559 aa6.34□□□□□ -1.39
USP54-202ENST00000413442 STX7O15400 261 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms