RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ACACAQ13085 2346 aa18.75■□□□□ 0.59
TRIM56-202ENST00000412507 ANKRD11Q6UB99 2663 aaPredicted RBP18.74■□□□□ 0.59
TRIM56-202ENST00000412507 LOC285095A0A1B0GVY8 99 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 GOLGA6L9A6NEM1 432 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 KCNN4O15554 427 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 OPA1O60313 960 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 GP1BAP07359 652 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 GNPDA1P46926 289 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 RPIAP49247 311 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 CCZ1BP86790 482 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 CCZ1P86791 482 aaPredicted RBP18.74■□□□□ 0.59
TRIM56-202ENST00000412507 CAMK2BQ13554 666 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 PERM1Q5SV97 790 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 HENMT1Q5T8I9 393 aaKnown RBP18.74■□□□□ 0.59
TRIM56-202ENST00000412507 TMC3Q7Z5M5 1100 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 SLC25A41Q8N5S1 370 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 KYQ8NBH2 561 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 IPMKQ8NFU5 416 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 COX14Q96I36 57 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 FERMT1Q9BQL6 677 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 GPR63Q9BZJ6 419 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 PADI4Q9UM07 663 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 SLC17A4Q9Y2C5 497 aa18.74■□□□□ 0.59
TRIM56-202ENST00000412507 RGSL1A5PLK6 1076 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 FADS2P1A8MWK0 482 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 AURKAO14965 403 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 CCDC175P0C221 793 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 CHRNA4P43681 627 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 TARDBPQ13148 414 aaKnown RBP eCLIP18.73■□□□□ 0.59
TRIM56-202ENST00000412507 MPP3Q13368 585 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 SIRPB2Q5JXA9 342 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 ANKRD20A2Q5SQ80 823 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 ANKRD20A1Q5TYW2 823 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 ANKRD20A3Q5VUR7 823 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 ALS2CLQ60I27 953 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 ITPRIPL1Q6GPH6 555 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 ARL10Q8N8L6 244 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 KDF1Q8NAX2 398 aaPredicted RBP18.73■□□□□ 0.59
TRIM56-202ENST00000412507 GPR26Q8NDV2 337 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 FAM46DQ8NEK8 389 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 MAPK15Q8TD08 544 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 GORASP1Q9BQQ3 440 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 GBA3Q9H227 469 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 GRPEL1Q9HAV7 217 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 LZTFL1Q9NQ48 299 aa18.73■□□□□ 0.59
TRIM56-202ENST00000412507 CNOT6Q9ULM6 557 aaKnown RBP18.73■□□□□ 0.59
TRIM56-202ENST00000412507 TCRBV7S2A1N4TA0A589 114 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 TMEM8BA6NDV4 472 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 TRABD2BA6NFA1 517 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 ASMTLO95671 621 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 MT-CO3P00414 261 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 EPOP01588 193 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 IVLP07476 585 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 TNNT3P45378 269 aaPredicted RBP18.72■□□□□ 0.59
TRIM56-202ENST00000412507 KLF1Q13351 362 aaPredicted RBP18.72■□□□□ 0.59
TRIM56-202ENST00000412507 MARK2Q7KZI7 788 aaKnown RBP18.72■□□□□ 0.59
TRIM56-202ENST00000412507 NRROSQ86YC3 692 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 SFTPA2Q8IWL1 248 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 TTC13Q8NBP0 860 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 CCDC110Q8TBZ0 833 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 GPBAR1Q8TDU6 330 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 ZCCHC14Q8WYQ9 949 aaKnown RBP18.72■□□□□ 0.59
TRIM56-202ENST00000412507 SRPK1Q96SB4 655 aaKnown RBP18.72■□□□□ 0.59
TRIM56-202ENST00000412507 SPATA16Q9BXB7 569 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 ABCG4Q9H172 646 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 TRNAU1APQ9NX07 287 aaKnown RBP18.72■□□□□ 0.59
TRIM56-202ENST00000412507 CLCA2Q9UQC9 943 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 R3HDM2Q9Y2K5 976 aaKnown RBP18.72■□□□□ 0.59
TRIM56-202ENST00000412507 GPSM3Q9Y4H4 160 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 DMXL2Q8TDJ6 3036 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 APC2O95996 2303 aa18.72■□□□□ 0.59
TRIM56-202ENST00000412507 STK10O94804 968 aaKnown RBP18.71■□□□□ 0.59
TRIM56-202ENST00000412507 AGTP01019 485 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 CAPNS1P04632 268 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 ATP1A1P05023 1023 aaKnown RBP18.71■□□□□ 0.59
TRIM56-202ENST00000412507 AK4P27144 223 aaPredicted RBP18.71■□□□□ 0.59
TRIM56-202ENST00000412507 PSMB4P28070 264 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 ADCY8P40145 1251 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 GEMP55040 296 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 SLC1A5Q15758 541 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 PDCD7Q8N8D1 485 aaKnown RBP18.71■□□□□ 0.59
TRIM56-202ENST00000412507 GPR156Q8NFN8 814 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 MDM1Q8TC05 714 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 NAT6Q93015 286 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 SCARF2Q96GP6 870 aaPredicted RBP18.71■□□□□ 0.59
TRIM56-202ENST00000412507 SPATA13Q96N96 652 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 FICDQ9BVA6 458 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 FSD1LQ9BXM9 530 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 GSDMCQ9BYG8 508 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 DPEP2Q9H4A9 486 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 BPIFA1Q9NP55 256 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 ZMIZ1Q9ULJ6 1067 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 PLEKHM1Q9Y4G2 1056 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 ST14Q9Y5Y6 855 aa18.71■□□□□ 0.59
TRIM56-202ENST00000412507 OAS3Q9Y6K5 1087 aaKnown RBP18.71■□□□□ 0.59
TRIM56-202ENST00000412507 B4DGG1 531 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 CASC3O15234 703 aaKnown RBP18.7■□□□□ 0.58
TRIM56-202ENST00000412507 NOBOXO60393 691 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 ANXA9O76027 345 aa18.7■□□□□ 0.58
TRIM56-202ENST00000412507 BPIP17213 487 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms