RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 GOLGA6DP0CG33 693 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 KELP23276 732 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 FDFT1P37268 417 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 SRP54P61011 504 aaKnown RBP13.09□□□□□ -0.31
HDAC8-210ENST00000412342 PPARDQ03181 441 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 PTPRCAPQ14761 206 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 PROX2Q3B8N5 592 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 ALS2CLQ60I27 953 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 GLT6D1Q7Z4J2 308 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 TRIM74Q86UV6 250 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 CREG2Q8IUH2 290 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 HID1Q8IV36 788 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 TRAM1L1Q8N609 369 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 EID2Q8N6I1 236 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 CCDC89Q8N998 374 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 OR4C6Q8NH72 309 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 ATL2Q8NHH9 583 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 DTX3LQ8TDB6 740 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 BTN2A2Q8WVV5 523 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 SCARF2Q96GP6 870 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-210ENST00000412342 NAP1L3Q99457 506 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-210ENST00000412342 NAPGQ99747 312 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-210ENST00000412342 BPIFA1Q9NP55 256 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 RAD18Q9NS91 495 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 GOLGA6AQ9NYA3 693 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 FEZ2Q9UHY8 353 aaPredicted RBP13.09□□□□□ -0.31
HDAC8-210ENST00000412342 TMPRSS11EQ9UL52 423 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 ARL5AQ9Y689 179 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 OAS3Q9Y6K5 1087 aaKnown RBP13.09□□□□□ -0.31
HDAC8-210ENST00000412342 CSNK1G3Q9Y6M4 447 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 SPTBN2O15020 2390 aa13.09□□□□□ -0.31
HDAC8-210ENST00000412342 LY6G6EA0A0G2JKS1 128 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 SPAARA0A1B0GVQ0 90 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 PRSS38A1L453 326 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 PDE2AO00408 941 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 SCAMP1O15126 338 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 PSMD3O43242 534 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 AQP9O43315 295 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 LDB2O43679 373 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 BUD23O43709 281 aaKnown RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 PHF2O75151 1096 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 CA5AP35218 305 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 COILP38432 576 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 GRIA1P42261 906 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 TNNT3P45378 269 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 POLD2P49005 469 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 BLKP51451 505 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 ZNF140P52738 457 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 TAF1AQ15573 450 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 TRIP6Q15654 476 aaKnown RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 INAVAQ3KP66 663 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 PRRT3Q5FWE3 981 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 PDPK2PQ6A1A2 396 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 BRSK1Q8TDC3 778 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 MAGOHBQ96A72 148 aaKnown RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 HIC2Q96JB3 615 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 C19orf43Q9BQ61 176 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 ZSCAN5AQ9BUG6 496 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 IL26Q9NPH9 171 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 RAB6BQ9NRW1 208 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 NLGN3Q9NZ94 848 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 SPASTQ9UBP0 616 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 KCTD3Q9Y597 815 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 PCYT1BQ9Y5K3 369 aaPredicted RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 ST14Q9Y5Y6 855 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 U3KQA8 63 aa13.08□□□□□ -0.32
HDAC8-210ENST00000412342 ZFC3H1O60293 1989 aaKnown RBP13.08□□□□□ -0.32
HDAC8-210ENST00000412342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-210ENST00000412342 CTAGE9A4FU28 777 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 LMO7DNF2Z398 122 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 INPP4BO15327 924 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 FFAR2O15552 330 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 SIGLEC6O43699 453 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 IVLP07476 585 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 ACTN2P35609 894 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 SPAM1P38567 509 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 C1orf61Q13536 156 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 N4BP2L1Q5TBK1 243 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-210ENST00000412342 CCDC137Q6PK04 289 aaKnown RBP13.07□□□□□ -0.32
HDAC8-210ENST00000412342 ERMP1Q7Z2K6 904 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 FSTL5Q8N475 847 aaPredicted RBP13.07□□□□□ -0.32
HDAC8-210ENST00000412342 OR52K1Q8NGK4 314 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 LMX1AQ8TE12 382 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 VPS35Q96QK1 796 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 CDC6Q99741 560 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 SPATA16Q9BXB7 569 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 SLC13A1Q9BZW2 595 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 CYP4F12Q9HCS2 524 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 CASS4Q9NQ75 786 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 EIF2B3Q9NR50 452 aaKnown RBP13.07□□□□□ -0.32
HDAC8-210ENST00000412342 PIH1D1Q9NWS0 290 aaKnown RBP13.07□□□□□ -0.32
HDAC8-210ENST00000412342 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
HDAC8-210ENST00000412342 SUFUQ9UMX1 484 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 TMEM98Q9Y2Y6 226 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 SAR1BQ9Y6B6 198 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 SPEGQ15772 3267 aa13.07□□□□□ -0.32
HDAC8-210ENST00000412342 COL27A1Q8IZC6 1860 aaPredicted RBP13.06□□□□□ -0.32
HDAC8-210ENST00000412342 MED19A0JLT2 244 aaPredicted RBP13.06□□□□□ -0.32
HDAC8-210ENST00000412342 TPP1O14773 563 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms