RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 SPASTQ9UBP0 616 aa8.18□□□□□ -1.1
RPE-204ENST00000411934 KLQ9UEF7 1012 aa8.18□□□□□ -1.1
RPE-204ENST00000411934 APOBEC3BQ9UH17 382 aaKnown RBP8.18□□□□□ -1.1
RPE-204ENST00000411934 SLC17A4Q9Y2C5 497 aa8.18□□□□□ -1.1
RPE-204ENST00000411934 CA5BQ9Y2D0 317 aa8.18□□□□□ -1.1
RPE-204ENST00000411934 ASCC3Q8N3C0 2202 aaKnown RBP8.18□□□□□ -1.1
RPE-204ENST00000411934 CABIN1Q9Y6J0 2220 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 PRSS38A1L453 326 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 HEATR9A2RTY3 570 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 KLHL33A6NCF5 533 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 A8MX80 341 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 LMO7DNF2Z398 122 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 SCAMP1O15126 338 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 STX7O15400 261 aaKnown RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 AQP9O43315 295 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 CBFA2T3O75081 653 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 AGTP01019 485 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 MLNP12872 115 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 BPIP17213 487 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 JUNDP17535 347 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 DGKAP23743 735 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 CASQ1P31415 396 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 RPL22P35268 128 aaKnown RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 CHRNA4P43681 627 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 ZNF140P52738 457 aaPredicted RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 SRP54P61011 504 aaKnown RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 EIF2B5Q13144 721 aaKnown RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 TUBB2AQ13885 445 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 LRP8Q14114 963 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 DHX34Q14147 1143 aaKnown RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 SHBQ15464 509 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 DENND2CQ68D51 928 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 ERMP1Q7Z2K6 904 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 ZNF572Q7Z3I7 529 aaPredicted RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 SLC25A41Q8N5S1 370 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 PDCD7Q8N8D1 485 aaKnown RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 FAM181AQ8N9Y4 354 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 PLA2G15Q8NCC3 412 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 GPR26Q8NDV2 337 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 ZNF548Q8NEK5 533 aaPredicted RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 OR4C6Q8NH72 309 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 BLOC1S5Q8TDH9 187 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 STYXQ8WUJ0 223 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 HEXDCQ8WVB3 486 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 ULK4Q96C45 1275 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 EID2BQ96D98 161 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 SGSM3Q96HU1 749 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 MS4A14Q96JA4 679 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 HIC2Q96JB3 615 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 TUBB2BQ9BVA1 445 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 RIOK2Q9BVS4 552 aaKnown RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 IL22Q9GZX6 179 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 CASS4Q9NQ75 786 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 FSCN3Q9NQT6 498 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 TRNAU1APQ9NX07 287 aaKnown RBP8.17□□□□□ -1.1
RPE-204ENST00000411934 DNAJC28Q9NX36 388 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 PCOLCE2Q9UKZ9 415 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 SHOC2Q9UQ13 582 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 NEU2Q9Y3R4 380 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 OR1A2Q9Y585 309 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 SPO11Q9Y5K1 396 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 LAMA1P25391 3075 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 CFAP54Q96N23 3096 aa8.17□□□□□ -1.1
RPE-204ENST00000411934 GLYATL1P3A0A0U1RQE8 302 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 MROH6A6NGR9 719 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 AGAP14A8MT82 685 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 K7ESM1 405 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 VEGFDO43915 354 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 TRIM16O95361 564 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 TNFP01375 233 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 KRT14P02533 472 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 APRTP07741 180 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 PIRTP0C851 137 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 KCNJ1P48048 391 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 LMAN1P49257 510 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 CLCNKAP51800 687 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 BASP1P80723 227 aaKnown RBP8.16□□□□□ -1.1
RPE-204ENST00000411934 SEMG2Q02383 582 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 ILKQ13418 452 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 PTK6Q13882 451 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 KCNJ11Q14654 390 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 ALG11Q2TAA5 492 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 UAP1L1Q3KQV9 507 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 GPR33Q49SQ1 333 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 LDLRAP1Q5SW96 308 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 TPRG1LQ5T0D9 272 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 ZCCHC8Q6NZY4 707 aaKnown RBP8.16□□□□□ -1.1
RPE-204ENST00000411934 TTC27Q6P3X3 843 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 ENPP7Q6UWV6 458 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 PPP1R21Q6ZMI0 780 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 KDELC2Q7Z4H8 507 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 PCGF5Q86SE9 256 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 HOOK3Q86VS8 718 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 GKN2Q86XP6 184 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 DNAAF3Q8N9W5 541 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 GLIS1Q8NBF1 620 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 MCUQ8NE86 351 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 DDHD1Q8NEL9 900 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 GLMNQ92990 594 aa8.16□□□□□ -1.1
RPE-204ENST00000411934 SCAMP4Q969E2 229 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms