RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 CTAGE9A4FU28 777 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 ZNHIT1O43257 154 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 IFIT1P09914 478 aaKnown RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 CTAGE8P0CG41 777 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 POLR2CP19387 275 aaPredicted RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 CNTFP26441 200 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 HOXA1P49639 335 aaPredicted RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 MMP14P50281 582 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 HSD17B4P51659 736 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 TERF1P54274 439 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 TAS2R38P59533 333 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 RPL24P83731 157 aaKnown RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 PMP22Q01453 160 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 FOXM1Q08050 763 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 CAMK1Q14012 370 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 ALG11Q2TAA5 492 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 TMEM35AQ53FP2 167 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 CCNYL2Q5T2Q4 361 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 SIGIRRQ6IA17 410 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 TTI2Q6NXR4 508 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 BRAT1Q6PJG6 821 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 ATF7IPQ6VMQ6 1270 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 ZNF497Q6ZNH5 498 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 SLC46A3Q7Z3Q1 461 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 MYPOPQ86VE0 399 aaPredicted RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 LRRTM4Q86VH4 590 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 CTAGE4Q8IX94 777 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 CCDC13Q8IYE1 715 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 BEST3Q8N1M1 668 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 SRBD1Q8N5C6 995 aaKnown RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 ZNF248Q8NDW4 579 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 DBF4BQ8NFT6 615 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 ZCCHC10Q8TBK6 192 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 LGALS12Q96DT0 336 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 KIF1BPQ96EK5 621 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 LINGO1Q96FE5 620 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 MAELQ96JY0 434 aaKnown RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 NEUROD6Q96NK8 337 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 QRFPRQ96P65 431 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 FUZQ9BT04 418 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 FSD1Q9BTV5 496 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 IFIH1Q9BYX4 1025 aaKnown RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 TFB2MQ9H5Q4 396 aaKnown RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 PPCSQ9HAB8 311 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 UPF2Q9HAU5 1272 aaKnown RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 ACSS1Q9NUB1 689 aaPredicted RBP1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 ACSL5Q9ULC5 683 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 KCNK7Q9Y2U2 307 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 UTYO14607 1347 aa1.9□□□□□ -2.11
RNU2-54P-201ENST00000410299 ZCWPW2A0A1B0GU75 182 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 SMIM1B2RUZ4 78 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 BLOC1S5-TXNDC5H3BN57 136 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 SPINT2O43291 252 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 SYNGR3O43761 229 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 IGHV4-39P01824 125 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 POLBP06746 335 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 INHBAP08476 426 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 HNRNPA1P09651 372 aaKnown RBP eCLIP1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 FAM106CPP0CH98 169 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 RNF224P0DH78 156 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 DCTP40126 519 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 GABRB2P47870 512 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 DRG2P55039 364 aaKnown RBP1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 RPP30P78346 268 aaKnown RBP1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 COG7P83436 770 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 RUNX1T1Q06455 604 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 GALNT2Q10471 571 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 GAGE5Q13069 117 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 GAGE6Q13070 117 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 PPIGQ13427 754 aaKnown RBP eCLIP1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 FGFBP1Q14512 234 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 GPR68Q15743 365 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 TAF12Q16514 161 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 WDR38Q5JTN6 314 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 SFMBT2Q5VUG0 894 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 FRG2Q64ET8 278 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 SLC27A1Q6PCB7 646 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 C15orf39Q6ZRI6 1047 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 NRROSQ86YC3 692 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 ANKRD18AQ8IVF6 992 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 ADSSL1Q8N142 457 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 STPG4Q8N801 248 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 ADAD2Q8NCV1 583 aaKnown RBP1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 SLC44A1Q8WWI5 657 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 TM9SF4Q92544 642 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 APBB2Q92870 758 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 KLHL29Q96CT2 875 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 STAMBPL1Q96FJ0 436 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 APOPT1Q96IL0 206 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 PPP1R13BQ96KQ4 1090 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 C17orf77Q96MU5 243 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 EIF2AK1Q9BQI3 630 aaKnown RBP1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 NEURL2Q9BR09 285 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 MAP3K20Q9NYL2 800 aaKnown RBP1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 KLHL20Q9Y2M5 609 aa1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 AAR2Q9Y312 384 aaKnown RBP1.89□□□□□ -2.11
RNU2-54P-201ENST00000410299 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
RNU2-54P-201ENST00000410299 IGKV3D-20A0A0C4DH25 116 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms