RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 TMEM98Q9Y2Y6 226 aa14.44□□□□□ -0.1
MCF2L-210ENST00000409954 PPM1DO15297 605 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 EFSO43281 561 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 CLDN7O95471 211 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 ASMTLO95671 621 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 SOD1P00441 154 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 JCHAINP01591 159 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 TPM1P09493 284 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 TMEM253P0C7T8 217 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 ZFXP17010 805 aaPredicted RBP14.43□□□□□ -0.1
MCF2L-210ENST00000409954 GJC1P36383 396 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 TAS2R40P59535 323 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 GPLD1P80108 840 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 NIPAL4Q0D2K0 466 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 SLC10A2Q12908 348 aaPredicted RBP14.43□□□□□ -0.1
MCF2L-210ENST00000409954 ASTE1Q2TB18 679 aaPredicted RBP14.43□□□□□ -0.1
MCF2L-210ENST00000409954 MAP9Q49MG5 647 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 RFLNAQ6ZTI6 216 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 GALNT13Q8IUC8 556 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 ZSCAN1Q8NBB4 408 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 OR4D9Q8NGE8 314 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 USP7Q93009 1102 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 COX14Q96I36 57 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 DNAJC7Q99615 494 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 ANP32EQ9BTT0 268 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 XPO4Q9C0E2 1151 aaKnown RBP14.43□□□□□ -0.1
MCF2L-210ENST00000409954 BRD8Q9H0E9 1235 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 RMI1Q9H9A7 625 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 RDH14Q9HBH5 336 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 DTLQ9NZJ0 730 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 PKD2L2Q9NZM6 624 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 VPS18Q9P253 973 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 ZNHIT2Q9UHR6 403 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 TTLL3Q9Y4R7 772 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 ST14Q9Y5Y6 855 aa14.43□□□□□ -0.1
MCF2L-210ENST00000409954 AKR1B10O60218 316 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 ITIH1P19827 911 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 SPINT3P49223 89 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 LIMK2P53671 638 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 MAPK10P53779 464 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 GBE1Q04446 702 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 PPIDQ08752 370 aaKnown RBP14.42□□□□□ -0.1
MCF2L-210ENST00000409954 IHHQ14623 411 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 MESDQ14696 234 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 TMEM71Q6P5X7 295 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 DOK6Q6PKX4 331 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 ZNF574Q6ZN55 896 aaPredicted RBP14.42□□□□□ -0.1
MCF2L-210ENST00000409954 TMPRSS9Q7Z410 1059 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 RHOT2Q8IXI1 618 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.42□□□□□ -0.1
MCF2L-210ENST00000409954 SLC35G2Q8TBE7 412 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 RAPGEF5Q92565 580 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 SH3KBP1Q96B97 665 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 MED8Q96G25 268 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 CCDC42Q96M95 316 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 TAAR9Q96RI9 348 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 RAD18Q9NS91 495 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 WDR70Q9NW82 654 aa14.42□□□□□ -0.1
MCF2L-210ENST00000409954 LRRK1Q38SD2 2015 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 UNC13CQ8NB66 2214 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 IGHV1OR21-1A0A087WYE8 117 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 PRAMEF33A0A0G2JMD5 474 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 IGHV5-10-1A0A0J9YXX1 117 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 A0A0U1RQS6 177 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-210ENST00000409954 PRAMEF10O60809 474 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 MAP3K6O95382 1288 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 HLA-DQB2P05538 268 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 CSTF2P33240 577 aaKnown RBP eCLIP14.41□□□□□ -0.1
MCF2L-210ENST00000409954 FASLGP48023 281 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 IFI35P80217 286 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-210ENST00000409954 PDK1Q15118 436 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 QPCTQ16769 361 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 ODF2Q5BJF6 829 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 MANEAQ5SRI9 462 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 LRRC38Q5VT99 294 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 MARK2Q7KZI7 788 aaKnown RBP14.41□□□□□ -0.1
MCF2L-210ENST00000409954 BZW1Q7L1Q6 419 aaKnown RBP14.41□□□□□ -0.1
MCF2L-210ENST00000409954 DTX1Q86Y01 620 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 AGBL5Q8NDL9 886 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 CCDC112Q8NEF3 446 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 LPCAT1Q8NF37 534 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.41□□□□□ -0.1
MCF2L-210ENST00000409954 PTCD2Q8WV60 388 aaKnown RBP14.41□□□□□ -0.1
MCF2L-210ENST00000409954 SGF29Q96ES7 293 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 SRPK1Q96SB4 655 aaKnown RBP14.41□□□□□ -0.1
MCF2L-210ENST00000409954 AGAP2Q99490 1192 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 SLC38A3Q99624 504 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 PACSIN1Q9BY11 444 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 KCNK4Q9NYG8 393 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 CNOT6Q9ULM6 557 aaKnown RBP14.41□□□□□ -0.1
MCF2L-210ENST00000409954 PCDHGA3Q9Y5H0 932 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 BPTFQ12830 3046 aa14.41□□□□□ -0.1
MCF2L-210ENST00000409954 C1orf232A0A0U1RR37 186 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 LRRD1A4D1F6 860 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 OR5K4A6NMS3 321 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 C9orf172C9J069 976 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 INPP4BO15327 924 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 DNAJC6O75061 913 aa14.4□□□□□ -0.1
MCF2L-210ENST00000409954 ITGB2P05107 769 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms