RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 BTNL10A8MVZ5 291 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 FADS2P1A8MWK0 482 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 CTNNA1P35221 906 aaKnown RBP17.6■□□□□ 0.41
LSM5-204ENST00000409909 EIF2S3P41091 472 aaKnown RBP17.6■□□□□ 0.41
LSM5-204ENST00000409909 LSSP48449 732 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 GABREP78334 506 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 ILF3Q12906 894 aaKnown RBP eCLIP17.6■□□□□ 0.41
LSM5-204ENST00000409909 SLC14A2Q15849 920 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 PPP2R5EQ16537 467 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 COL28A1Q2UY09 1125 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 C14orf28Q4W4Y0 310 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 HENMT1Q5T8I9 393 aaKnown RBP17.6■□□□□ 0.41
LSM5-204ENST00000409909 BBS12Q6ZW61 710 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 C17orf82Q86X59 251 aaPredicted RBP17.6■□□□□ 0.41
LSM5-204ENST00000409909 OR6C4Q8NGE1 309 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 WDR48Q8TAF3 677 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 RBM41Q96IZ5 413 aaKnown RBP17.6■□□□□ 0.41
LSM5-204ENST00000409909 DCBLD2Q96PD2 775 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 GSDMCQ9BYG8 508 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 FAM83DQ9H4H8 585 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 SYNDIG1Q9H7V2 258 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 POLR1BQ9H9Y6 1135 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 UBP1Q9NZI7 540 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 TAAR2Q9P1P5 351 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 APPL1Q9UKG1 709 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 LHX6Q9UPM6 363 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 SHOC2Q9UQ13 582 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 PCDHA3Q9Y5H8 950 aa17.6■□□□□ 0.41
LSM5-204ENST00000409909 PCYT1BQ9Y5K3 369 aaPredicted RBP17.6■□□□□ 0.41
LSM5-204ENST00000409909 OAS3Q9Y6K5 1087 aaKnown RBP17.6■□□□□ 0.41
LSM5-204ENST00000409909 PMS2P1A4D2B8 440 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 RGSL1A5PLK6 1076 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 PJA2O43164 708 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 PMPCBO75439 489 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 IPO7O95373 1038 aaKnown RBP17.59■□□□□ 0.41
LSM5-204ENST00000409909 ATP1A1P05023 1023 aaKnown RBP17.59■□□□□ 0.41
LSM5-204ENST00000409909 RPLP0P05388 317 aaKnown RBP17.59■□□□□ 0.41
LSM5-204ENST00000409909 PYGLP06737 847 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 GLB1P16278 677 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 NFKB1P19838 968 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 SPIDRQ14159 915 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 TBC1D25Q3MII6 688 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 PYCR3Q53H96 274 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 SLC30A9Q6PML9 568 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 MARK2Q7KZI7 788 aaKnown RBP17.59■□□□□ 0.41
LSM5-204ENST00000409909 TMC3Q7Z5M5 1100 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 Q8N9G6 341 aaPredicted RBP17.59■□□□□ 0.41
LSM5-204ENST00000409909 LRRC57Q8N9N7 239 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 SNIP1Q8TAD8 396 aaKnown RBP17.59■□□□□ 0.41
LSM5-204ENST00000409909 CCHCR1Q8TD31 782 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 FGF11Q92914 225 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 GRAMD1AQ96CP6 724 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 CALR3Q96L12 384 aaKnown RBP17.59■□□□□ 0.41
LSM5-204ENST00000409909 QKIQ96PU8 341 aaKnown RBP eCLIP17.59■□□□□ 0.41
LSM5-204ENST00000409909 BAG1Q99933 345 aaPredicted RBP17.59■□□□□ 0.41
LSM5-204ENST00000409909 C10orf88Q9H8K7 445 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 ZFYVE1Q9HBF4 777 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 MAGEE1Q9HCI5 957 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 PKD2L2Q9NZM6 624 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 LRIT1Q9P2V4 623 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 SATB2Q9UPW6 733 aa17.59■□□□□ 0.41
LSM5-204ENST00000409909 A0A0U1RQJ8 604 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 GRID2IPA4D2P6 1211 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 DXOO77932 396 aaKnown RBP17.58■□□□□ 0.4
LSM5-204ENST00000409909 NDST3O95803 873 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 ITPKBP27987 946 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 ACTN2P35609 894 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 VAV2P52735 878 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 NAP1L1P55209 391 aaKnown RBP17.58■□□□□ 0.4
LSM5-204ENST00000409909 MAZP56270 477 aaKnown RBP17.58■□□□□ 0.4
LSM5-204ENST00000409909 COPS2P61201 443 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 C3orf38Q5JPI3 329 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 KDELC1Q6UW63 502 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 B3GNT8Q7Z7M8 397 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 CCNJLQ8IV13 435 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 ZNF567Q8N184 647 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 GPR26Q8NDV2 337 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 KIAA1524Q8TCG1 905 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 ZDHHC1Q8WTX9 485 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 PATE1Q8WXA2 126 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 HTR3CQ8WXA8 447 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 PRR11Q96HE9 360 aaPredicted RBP17.58■□□□□ 0.4
LSM5-204ENST00000409909 OR2M4Q96R27 311 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 GFM1Q96RP9 751 aaKnown RBP17.58■□□□□ 0.4
LSM5-204ENST00000409909 LRRN3Q9H3W5 708 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 ZNF711Q9Y462 761 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 SPO11Q9Y5K1 396 aa17.58■□□□□ 0.4
LSM5-204ENST00000409909 MGAQ8IWI9 3026 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 LOC285095A0A1B0GVY8 99 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 HACD1B0YJ81 288 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 D6RAR5 112 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 F5H423 210 aaPredicted RBP17.57■□□□□ 0.4
LSM5-204ENST00000409909 APOC4-APOC2K7ER74 178 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 AURKAO14965 403 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 MTSS1O43312 755 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 NUDT21O43809 227 aaKnown RBP17.57■□□□□ 0.4
LSM5-204ENST00000409909 DNAJC6O75061 913 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 ECEL1O95672 775 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 APOC2P02655 101 aa17.57■□□□□ 0.4
LSM5-204ENST00000409909 PNLIPP16233 465 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms