RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 MPP3Q13368 585 aa14.3□□□□□ -0.12
MINDY4-202ENST00000409881 RUNX3Q13761 415 aa14.3□□□□□ -0.12
MINDY4-202ENST00000409881 PARP15Q460N3 678 aa14.3□□□□□ -0.12
MINDY4-202ENST00000409881 N4BP2L1Q5TBK1 243 aaPredicted RBP14.3□□□□□ -0.12
MINDY4-202ENST00000409881 IL31Q6EBC2 164 aa14.3□□□□□ -0.12
MINDY4-202ENST00000409881 CAND1Q86VP6 1230 aaKnown RBP14.3□□□□□ -0.12
MINDY4-202ENST00000409881 CDKL3Q8IVW4 592 aaPredicted RBP14.3□□□□□ -0.12
MINDY4-202ENST00000409881 LILRA2Q8N149 483 aa14.3□□□□□ -0.12
MINDY4-202ENST00000409881 SLC17A6Q9P2U8 582 aa14.3□□□□□ -0.12
MINDY4-202ENST00000409881 NUP205Q92621 2012 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 E9PBE3 544 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 AIM2O14862 343 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 NCAM2O15394 837 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 HOXC11O43248 304 aaPredicted RBP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 KLHL41O60662 606 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 APRTP07741 180 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 NELFEP18615 380 aaKnown RBP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 MZF1P28698 734 aaPredicted RBP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 CD70P32970 193 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 YBEYP58557 167 aaPredicted RBP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 LMAN2Q12907 356 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 ALDH16A1Q8IZ83 802 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 FIBINQ8TAL6 211 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 QKIQ96PU8 341 aaKnown RBP eCLIP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 SORT1Q99523 831 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 MAGEH1Q9H213 219 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 STN1Q9H668 368 aaKnown RBP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 THEGQ9P2T0 379 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 RSL24D1Q9UHA3 163 aaKnown RBP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 RIMS3Q9UJD0 308 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 PAIP2BQ9ULR5 123 aaKnown RBP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 KIF26AQ9ULI4 1882 aaPredicted RBP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 ZNF189O75820 626 aaPredicted RBP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 BORAQ6PGQ7 559 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 C10orf107Q8IVU9 208 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 BBS5Q8N3I7 341 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 MPP5Q8N3R9 675 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 SMYD1Q8NB12 490 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 PPP4R1Q8TF05 950 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 SP110Q9HB58 689 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 ATP13A1Q9HD20 1204 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 ABCB8Q9NUT2 735 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 FAIMQ9NVQ4 179 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 DNAJC28Q9NX36 388 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 SEPT10Q9P0V9 454 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 KIAA1522Q9P206 1035 aaPredicted RBP14.29□□□□□ -0.12
MINDY4-202ENST00000409881 VPS28Q9UK41 221 aa14.29□□□□□ -0.12
MINDY4-202ENST00000409881 ZNF195O14628 629 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 KCNN4O15554 427 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 RBL1P28749 1068 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 HLA-FP30511 346 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 GMPRP36959 345 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 NUDT2P50583 147 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 SMAD1Q15797 465 aaKnown RBP14.28□□□□□ -0.12
MINDY4-202ENST00000409881 ASTLQ6HA08 431 aaPredicted RBP14.28□□□□□ -0.12
MINDY4-202ENST00000409881 C12orf40Q86WS4 652 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 TICAM1Q8IUC6 712 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 UNC5BQ8IZJ1 945 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 RNF148Q8N7C7 305 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 HDAC11Q96DB2 347 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 PKP2Q99959 881 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 IPO11Q9UI26 975 aaKnown RBP14.28□□□□□ -0.12
MINDY4-202ENST00000409881 UNC80Q8N2C7 3258 aa14.28□□□□□ -0.12
MINDY4-202ENST00000409881 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.27□□□□□ -0.12
MINDY4-202ENST00000409881 HACD1B0YJ81 288 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 TRIM24O15164 1050 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 CACNG3O60359 315 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 THRAP10827 490 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 XRCC1P18887 633 aaPredicted RBP14.27□□□□□ -0.12
MINDY4-202ENST00000409881 CD97P48960 835 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 OXCT1P55809 520 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 KLF10Q13118 480 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 SERINC3Q13530 473 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 FLOT2Q14254 428 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 PCLAFQ15004 111 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 ITPRIPL2Q3MIP1 535 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 HEATR6Q6AI08 1181 aaKnown RBP14.27□□□□□ -0.12
MINDY4-202ENST00000409881 ZNF783Q6ZMS7 281 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 ERI1Q8IV48 349 aaKnown RBP14.27□□□□□ -0.12
MINDY4-202ENST00000409881 TRIML2Q8N7C3 387 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 GRIN3AQ8TCU5 1115 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 CSGALNACT1Q8TDX6 532 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 CCT7Q99832 543 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 FEM1AQ9BSK4 669 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 INIPQ9NRY2 104 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 IGSF9Q9P2J2 1179 aa14.27□□□□□ -0.12
MINDY4-202ENST00000409881 J3KR12 359 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 KCNK1O00180 336 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 CBX4O00257 560 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 ARNTLO00327 626 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 MAFKO60675 156 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 SERPINE1P05121 402 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 GLDCP23378 1020 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 SERPINB5P36952 375 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 ETFBP38117 255 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 ENTPD1P49961 510 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 THOP1P52888 689 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 LPCAT2Q7L5N7 544 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 APCDD1Q8J025 514 aa14.27□□□□□ -0.13
MINDY4-202ENST00000409881 SLC44A3Q8N4M1 653 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms