RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 TPRKBQ9Y3C4 175 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 PTGES3LE9PB15 166 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 G3V2T6 193 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 K7ERI5 159 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 GDF11O95390 407 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 ITGBL1O95965 494 aaPredicted RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 MTHFD1P11586 935 aaKnown RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 BAG6P46379 1132 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 GLUD2P49448 558 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 GSK3BP49841 420 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 EEFSECP57772 596 aaKnown RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 POU5F1BQ06416 359 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 CD47Q08722 323 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 CA9Q16790 459 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 OTOP3Q7RTS5 596 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 STK32CQ86UX6 486 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 FAM35AQ86V20 835 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 GATAD2AQ86YP4 633 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 RIMKLAQ8IXN7 391 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 REM2Q8IYK8 340 aaPredicted RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 CENPLQ8N0S6 344 aaPredicted RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 SVOPLQ8N434 492 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 PSD4Q8NDX1 1056 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 PJA1Q8NG27 643 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 PIK3R3Q92569 461 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 TMBIM1Q969X1 311 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 MARVELD3Q96A59 401 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 REXO5Q96IC2 774 aaKnown RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 APOL4Q9BPW4 351 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 RBM4BQ9BQ04 359 aaKnown RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 TRMOQ9BU70 441 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 RBM4Q9BWF3 364 aaKnown RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 C12orf4Q9NQ89 552 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 MAGED2Q9UNF1 606 aaPredicted RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 PCDHA10Q9Y5I2 948 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 F5H423 210 aaPredicted RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 ERVH48-1M5A8F1 160 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 MATN4O95460 622 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 RAP2AP10114 183 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 HNRNPLP14866 589 aaKnown RBP eCLIP5.82□□□□□ -1.481e-7■■■■□ 20.9
R3HDM1-202ENST00000409478 STMN1P16949 149 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 ALOX12P18054 663 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 PSMB4P28070 264 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 HTR1EP28566 365 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 PTGS2P35354 604 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 RAB10P61026 200 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 NCS1P62166 190 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 EN1Q05925 392 aaPredicted RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 PTPN11Q06124 597 aaPredicted RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 PIGFQ07326 219 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 NFIAQ12857 509 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 STARD3Q14849 445 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 TSTD2Q5T7W7 516 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 DEFB132Q7Z7B7 95 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 FAM160B2Q86V87 743 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 DCP1BQ8IZD4 617 aaKnown RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 AMER2Q8N7J2 671 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 DPF3Q92784 378 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 PEX13Q92968 403 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 TMEM125Q96AQ2 219 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 BIRC7Q96CA5 298 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 SEPHS2Q99611 448 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 OSBPL2Q9H1P3 480 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 OPTCQ9UBM4 332 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 GTF2IRD1Q9UHL9 959 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 MAGEL2Q9UJ55 1249 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 C3orf18Q9UK00 162 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 KCNH4Q9UQ05 1017 aa5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 COL16A1Q07092 1604 aaPredicted RBP5.82□□□□□ -1.48
R3HDM1-202ENST00000409478 A0A1W2PQ72 361 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 METTL15A6NJ78 407 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 EFCAB9A8MZ26 197 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 LOC110117498-PIK3R3F6TDL0 507 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 FXYD1O00168 92 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 PPEF1O14829 653 aaPredicted RBP5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 PLA2G6O60733 806 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 ASNSP08243 561 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 PCNAP12004 261 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 DDX5P17844 614 aaKnown RBP5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 SAT1P21673 171 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 ALDH4A1P30038 563 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 HTR2BP41595 481 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 LIPEQ05469 1076 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 CLCA4Q14CN2 919 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 CTU2Q2VPK5 515 aaKnown RBP5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 C5orf22Q49AR2 442 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 VPS26BQ4G0F5 336 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 FAM98BQ52LJ0 330 aaKnown RBP5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 TPRG1LQ5T0D9 272 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 ZNF691Q5VV52 312 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 NCBP2-AS2Q69YL0 99 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 TRNP1Q6NT89 227 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 APOBEC3HQ6NTF7 200 aaKnown RBP5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 XKRXQ6PP77 449 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 FAM183BPQ6ZVS7 135 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 VN1R5Q7Z5H4 357 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 NOXA1Q86UR1 476 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 RIOX2Q8IUF8 465 aa5.81□□□□□ -1.48
R3HDM1-202ENST00000409478 SLC22A9Q8IVM8 553 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms