RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 PRSS23O95084 383 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 HLA-DRAP01903 254 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 SNRPB2P08579 225 aaKnown RBP10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 IQCF3P0C7M6 154 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 PCNAP12004 261 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 PGAM1P18669 254 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 IL32P24001 234 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 PSMA2P25787 234 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 IL1R2P27930 398 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 HTR1BP28222 390 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 RBL1P28749 1068 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 HOXC8P31273 242 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 SSTR3P32745 418 aaPredicted RBP10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 SPRP35270 261 aaPredicted RBP10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 UGT2B10P36537 528 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 RAP1GAPP47736 663 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 RARRES1P49788 294 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 DYNLT1P63172 113 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 FADDQ13158 208 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 MBTPS1Q14703 1052 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 KIZQ2M2Z5 673 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 C2CD6Q53TS8 623 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 YIF1BQ5BJH7 314 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 RSBN1Q5VWQ0 802 aaPredicted RBP10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 REP15Q6BDI9 236 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 ZCCHC8Q6NZY4 707 aaKnown RBP10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 PSRC1Q6PGN9 363 aaPredicted RBP10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 TRAF7Q6Q0C0 670 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 NIPA1Q7RTP0 329 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 VN1R5Q7Z5H4 357 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 CDKL3Q8IVW4 592 aaPredicted RBP10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 DDIASQ8IXT1 998 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 ADGRG5Q8IZF4 528 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 SLC38A6Q8IZM9 456 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 MINDY1Q8N5J2 469 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 NATD1Q8N6N6 113 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 KCTD6Q8NC69 237 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 GALNT6Q8NCL4 622 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 TMEM161BQ8NDZ6 487 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 ZSWIM2Q8NEG5 633 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 IL17RDQ8NFM7 739 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 RIPOR3Q96MK2 946 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 KATNAL1Q9BW62 490 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 NOL6Q9H6R4 1146 aaKnown RBP10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 ZMAT5Q9UDW3 170 aaKnown RBP10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 NUP50Q9UKX7 468 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 MTF2Q9Y483 593 aaPredicted RBP10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 M0R3G1 203 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 ZBTB39O15060 712 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 RAD51BO15315 384 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 NRP2O60462 931 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 DAB1O75553 588 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 NADKO95544 446 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 TRUB2O95900 331 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 CFHP08603 1231 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SMIM10L2AP0DMW4 78 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SMIM10L2BP0DMW5 78 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 DNAJB2P25686 324 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 POLD2P49005 469 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 LIMK2P53671 638 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SMAD3P84022 425 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 IKZF1Q13422 519 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 CRY1Q16526 586 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 C5orf22Q49AR2 442 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 PAGE2BQ5JRK9 111 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 GLRA4Q5JXX5 417 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SPANXN3Q5MJ09 141 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 PNCKQ6P2M8 343 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 RNF19BQ6ZMZ0 732 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 PTRH1Q86Y79 214 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 CMTR2Q8IYT2 770 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 FAM109AQ8N4B1 249 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 HERVK_113Q902F9 699 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF516Q92618 1163 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SLC39A13Q96H72 371 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 FBXL20Q96IG2 436 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 RNF157Q96PX1 679 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 VPS35Q96QK1 796 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 MXRA8Q9BRK3 442 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 FEM1AQ9BSK4 669 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 CNPY3Q9BT09 278 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 REPIN1Q9BWE0 567 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 BTBD2Q9BX70 525 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 PBX4Q9BYU1 374 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 EPS8L2Q9H6S3 715 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 NMRAL1Q9HBL8 299 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SNX15Q9NRS6 342 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SETD4Q9NVD3 440 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 TNFRSF10DQ9UBN6 386 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 BAG5Q9UL15 447 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SPEF1Q9Y4P9 236 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 GOLGA8IPA6NC78 632 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 GOLGA8JA6NMD2 632 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF99A8MXY4 864 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 KCNU1A8MYU2 1149 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 H0YCG3 227 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 H7C0C1 242 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 SDHDO14521 159 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 TREHO43280 583 aa10.6□□□□□ -0.71
NIF3L1-204ENST00000409357 EXTL3O43909 919 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms