RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 Q6ZVL8 140 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 TECPR1Q7Z6L1 1165 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 VASH2Q86V25 355 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 NAGSQ8N159 534 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 BBS5Q8N3I7 341 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 ANKK1Q8NFD2 765 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 NSMCE1Q8WV22 266 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 HSPH1Q92598 858 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 ZNF653Q96CK0 615 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 TRIM11Q96F44 468 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 TAAR9Q96RI9 348 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 MGME1Q9BQP7 344 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 NUDT22Q9BRQ3 303 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 MYO1AQ9UBC5 1043 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 SLC17A4Q9Y2C5 497 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 PPIL1Q9Y3C6 166 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 ST14Q9Y5Y6 855 aa9.14□□□□□ -0.95
NIF3L1-203ENST00000409129 GOLGA6CA6NDK9 693 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 GOLGA6BA6NDN3 693 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 NPIPB15A6NHN6 443 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 PPM1DO15297 605 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 PGLSO95336 258 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 IVLP07476 585 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 GOLGA6DP0CG33 693 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 RARAP10276 462 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 FGF3P11487 239 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 SFTPCP11686 197 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 TCF4P15884 667 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 CTPS1P17812 591 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 WT1P19544 449 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 MMP13P45452 471 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 GPR1P46091 355 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 LIMK2P53671 638 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 CDH6P55285 790 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 MAXP61244 160 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 GUCA2AQ02747 115 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 SQSTM1Q13501 440 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 TRA2AQ13595 282 aaKnown RBP eCLIP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 PIGHQ14442 188 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 TBR1Q16650 682 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 SMTNL2Q2TAL5 461 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 FILIP1LQ4L180 1135 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 ARMC12Q5T9G4 340 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 NKAIN2Q5VXU1 208 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 E4F1Q66K89 784 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 RAET1GQ6H3X3 334 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 USP45Q70EL2 814 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 TSPAN33Q86UF1 283 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 NLRP8Q86W28 1048 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 NDUFAF2Q8N183 169 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 FAM26EQ8N5C1 309 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 ATPAF2Q8N5M1 289 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 RCBTB1Q8NDN9 531 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 PIH1D2Q8WWB5 315 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 PATE1Q8WXA2 126 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 HTR3CQ8WXA8 447 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 WNT2BQ93097 391 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 SCARF2Q96GP6 870 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 CCDC74BQ96LY2 380 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 GBP4Q96PP9 640 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 CSPG4P5Q96PW8 444 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 MCCC1Q96RQ3 725 aaPredicted RBP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 SEMA3CQ99985 751 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 NAT10Q9H0A0 1025 aaKnown RBP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 ISCUQ9H1K1 167 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 LRRC4CQ9HCJ2 640 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 GOLGA6AQ9NYA3 693 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 TMEM98Q9Y2Y6 226 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 PLEKHM1Q9Y4G2 1056 aa9.13□□□□□ -0.95
NIF3L1-203ENST00000409129 IGHV1OR21-1A0A087WYE8 117 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 A0A0U1RQS6 177 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 SMTNL1A8MU46 457 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 STMND1H3BQB6 276 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 FZD6O60353 706 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 PPFIA2O75334 1257 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 PDHA1P08559 390 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 SKILP12757 684 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 SERPINB6P35237 376 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 ACTR1BP42025 376 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 ARSDP51689 593 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 ACTR1AP61163 376 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 PTSQ03393 145 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 TYRO3Q06418 890 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 CCDC183Q5T5S1 534 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 TXNRD3NBQ6F5E7 133 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 DOK6Q6PKX4 331 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 ADAMTSL4Q6UY14 1074 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 RFLNAQ6ZTI6 216 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 LRRC49Q8IUZ0 686 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 TEX26Q8N6G2 289 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 AGBL5Q8NDL9 886 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 OR4D9Q8NGE8 314 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 TEKT4Q8WW24 435 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 JPH3Q8WXH2 748 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 NKD1Q969G9 470 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 AP2M1Q96CW1 435 aa9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 NAP1L5Q96NT1 182 aaPredicted RBP9.12□□□□□ -0.95
NIF3L1-203ENST00000409129 DPYSL5Q9BPU6 564 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms