RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TLE3Q04726 772 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 CDK18Q07002 472 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 NIPAL4Q0D2K0 466 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 CCDC173Q0VFZ6 552 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 SLC10A2Q12908 348 aaPredicted RBP9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 ZBTB17Q13105 803 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 TCEA2Q15560 299 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 PPP2R5EQ16537 467 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 QPCTQ16769 361 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 TEX44Q53QW1 395 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 TFDP3Q5H9I0 405 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 CCDC181Q5TID7 509 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 TMEM164Q5U3C3 297 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 FOXR1Q6PIV2 292 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 SLC30A9Q6PML9 568 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 SPOCD1Q6ZMY3 1216 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 RAB11FIP2Q7L804 512 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 GPR155Q7Z3F1 870 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 ZNF438Q7Z4V0 828 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 CLEC14AQ86T13 490 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 CPNE8Q86YQ8 564 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 TMTC1Q8IUR5 882 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 PHYKPLQ8IUZ5 450 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 CCDC50Q8IVM0 306 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 SPACA3Q8IXA5 215 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 RCOR2Q8IZ40 523 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 FBXO39Q8N4B4 442 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 TC2NQ8N9U0 490 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 LSM14AQ8ND56 463 aaKnown RBP9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 SH3KBP1Q96B97 665 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 HAUS1Q96CS2 278 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 IMP4Q96G21 291 aaKnown RBP9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 COX14Q96I36 57 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 SLC46A1Q96NT5 459 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 FCRL3Q96P31 734 aaPredicted RBP9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 AGAP3Q96P47 875 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 PPP1R2P1Q96PQ5 205 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 CMKLR1Q99788 373 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 RIOK2Q9BVS4 552 aaKnown RBP9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 ZMYND15Q9H091 742 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 TRABDQ9H4I3 376 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 SUDS3Q9H7L9 328 aaPredicted RBP9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 ZFYVE1Q9HBF4 777 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 MAGEE1Q9HCI5 957 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 ASCL3Q9NQ33 180 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 HACD3Q9P035 362 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 TAAR2Q9P1P5 351 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 CD84Q9UIB8 345 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 PCDHGA7Q9Y5G6 932 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 PCDHA13Q9Y5I0 950 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 RP1P56715 2156 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 OR5K4A6NMS3 321 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 CDRT15L2A8MXV6 281 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 HGSO14964 777 aaPredicted RBP9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 CST8O60676 142 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 STK10O94804 968 aaKnown RBP9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 TNFSF15O95150 251 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 CLDN7O95471 211 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 SOD1P00441 154 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 PRLP01236 227 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 CD82P27701 267 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 CDKN2BP42772 138 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 GPLD1P80108 840 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 SKOR1P84550 965 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 XRCC4Q13426 336 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 TRA2AQ13595 282 aaKnown RBP eCLIP9.02□□□□□ -0.97not detected■■□□□ 11.4
SNORD88A-201ENST00000408314 NR1D2Q14995 579 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 PRKD1Q15139 912 aaPredicted RBP9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 TAZQ16635 292 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 PYCR3Q53H96 274 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 HENMT1Q5T8I9 393 aaKnown RBP9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 ITPRIPL1Q6GPH6 555 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 MFSD7Q6UXD7 560 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 DAAM2Q86T65 1068 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 PIM3Q86V86 326 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 C17orf82Q86X59 251 aaPredicted RBP9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 PELI3Q8N2H9 469 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 TRAM1L1Q8N609 369 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 CNTD1Q8N815 330 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 Q8N9G6 341 aaPredicted RBP9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 SCAMP4Q969E2 229 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 TEKT5Q96M29 485 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 HERPUD2Q9BSE4 406 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 GPR63Q9BZJ6 419 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 ZCCHC2Q9C0B9 1178 aaKnown RBP9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 B3GNT4Q9C0J1 378 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 CARD9Q9H257 536 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 EPB41L1Q9H4G0 881 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 CAAP1Q9H8G2 361 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 GLOD4Q9HC38 313 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 KLHL8Q9P2G9 620 aaPredicted RBP9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 FAM153AQ9UHL3 310 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 TRHDEQ9UKU6 1024 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 ZNF711Q9Y462 761 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 ALG6Q9Y672 507 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 RNF215Q9Y6U7 377 aa9.02□□□□□ -0.97
SNORD88A-201ENST00000408314 A0A1W2PQM1 296 aa9.01□□□□□ -0.97
SNORD88A-201ENST00000408314 CCDC66A2RUB6 948 aa9.01□□□□□ -0.97
SNORD88A-201ENST00000408314 APOC4-APOC2K7ER74 178 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms