RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 CYP2U1Q7Z449 544 aa20.38■□□□□ 0.85
CHKB-201ENST00000406938 RAVER1Q8IY67 606 aaKnown RBP20.38■□□□□ 0.85
CHKB-201ENST00000406938 PIANPQ8IYJ0 282 aa20.38■□□□□ 0.85
CHKB-201ENST00000406938 NUS1Q96E22 293 aa20.38■□□□□ 0.85
CHKB-201ENST00000406938 CDH19Q9H159 772 aa20.38■□□□□ 0.85
CHKB-201ENST00000406938 FAM83DQ9H4H8 585 aa20.38■□□□□ 0.85
CHKB-201ENST00000406938 FAM96AQ9H5X1 160 aa20.38■□□□□ 0.85
CHKB-201ENST00000406938 PREBQ9HCU5 417 aa20.38■□□□□ 0.85
CHKB-201ENST00000406938 TBK1Q9UHD2 729 aa20.38■□□□□ 0.85
CHKB-201ENST00000406938 ZNF180Q9UJW8 692 aa20.38■□□□□ 0.85
CHKB-201ENST00000406938 IGLON5A6NGN9 336 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 GOLGA6L10A6NI86 522 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 APBB3O95704 486 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 MYZAPP0CAP1 466 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 OGNP20774 298 aaKnown RBP20.37■□□□□ 0.85
CHKB-201ENST00000406938 MAGEA9P43362 315 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 CREB5Q02930 508 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 TMED2Q15363 201 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 TYSND1Q2T9J0 566 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 HENMT1Q5T8I9 393 aaKnown RBP20.37■□□□□ 0.85
CHKB-201ENST00000406938 KIAA0408Q6ZU52 694 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 SNX20Q7Z614 316 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 CROCCP2Q86T23 111 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 NRSN1Q8IZ57 195 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 RIBC1Q8N443 379 aaPredicted RBP20.37■□□□□ 0.85
CHKB-201ENST00000406938 SH3GL2Q99962 352 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 SPATA16Q9BXB7 569 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 TPSD1Q9BZJ3 242 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 ABCG8Q9H221 673 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 CENPHQ9H3R5 247 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 ASB8Q9H765 288 aa20.37■□□□□ 0.85
CHKB-201ENST00000406938 FBXO6Q9NRD1 293 aaPredicted RBP20.37■□□□□ 0.85
CHKB-201ENST00000406938 ZFR2Q9UPR6 939 aaKnown RBP20.37■□□□□ 0.85
CHKB-201ENST00000406938 FAM47DPA6NHR8 397 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 IGLV3-19P01714 112 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 ACSL1P33121 698 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 ABCG1P45844 678 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 RASA2Q15283 850 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 AARS2Q5JTZ9 985 aaKnown RBP20.36■□□□□ 0.85
CHKB-201ENST00000406938 KIAA1161Q6NSJ0 714 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 TAS2R42Q7RTR8 314 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 AP2M1Q96CW1 435 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 RIOK2Q9BVS4 552 aaKnown RBP20.36■□□□□ 0.85
CHKB-201ENST00000406938 BTBD1Q9H0C5 482 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 LGALS13Q9UHV8 139 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 PLXNA2O75051 1894 aa20.36■□□□□ 0.85
CHKB-201ENST00000406938 TBC1D3DA0A087WVF3 549 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TBC1D3IA0A087WXS9 549 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TBC1D3EA0A087X179 549 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TBC1D3KA0A087X1G2 549 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TBC1D3FA6NER0 549 aaPredicted RBP20.35■□□□□ 0.85
CHKB-201ENST00000406938 TBC1D3LB9A6J9 549 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 RNGTTO60942 597 aaKnown RBP20.35■□□□□ 0.85
CHKB-201ENST00000406938 TM7SF2O76062 418 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 AHSGP02765 367 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TBC1D3HP0C7X1 549 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 UGT1A6P19224 532 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 AOC1P19801 751 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 UGT1A1P22309 533 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 UGT1A4P22310 534 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 GABRB3P28472 473 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 PMLP29590 882 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 CA5AP35218 305 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 UGT1A3P35503 534 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 UGT1A5P35504 534 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 CSE1LP55060 971 aaKnown RBP20.35■□□□□ 0.85
CHKB-201ENST00000406938 RPS21P63220 83 aaKnown RBP20.35■□□□□ 0.85
CHKB-201ENST00000406938 ZNF284Q2VY69 593 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 ATP13A5Q4VNC0 1218 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TMEM259Q4ZIN3 620 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 ZNF789Q5FWF6 425 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TBC1D3GQ6DHY5 549 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TBC1D3CQ6IPX1 549 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 SDCCAG8Q86SQ7 713 aaPredicted RBP20.35■□□□□ 0.85
CHKB-201ENST00000406938 TBC1D3Q8IZP1 549 aaPredicted RBP20.35■□□□□ 0.85
CHKB-201ENST00000406938 TRAM1L1Q8N609 369 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 ZNF398Q8TD17 642 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.35■□□□□ 0.85
CHKB-201ENST00000406938 ATXN7L3BQ96GX2 97 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 RBBP8Q99708 897 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 MCMBPQ9BTE3 642 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 ZSCAN5AQ9BUG6 496 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 KDM4CQ9H3R0 1056 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 CYP8B1Q9UNU6 501 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TECTAO75443 2155 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TRBV5-4A0A0C4DH59 114 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 A0A1W2PQU0 124 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TMEM221A6NGB7 291 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 M0R296 226 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 OPA1O60313 960 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 CXCL12P48061 93 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 LEPRP48357 1165 aaKnown RBP20.35■□□□□ 0.85
CHKB-201ENST00000406938 PXNP49023 591 aaPredicted RBP20.35■□□□□ 0.85
CHKB-201ENST00000406938 CCR3P51677 355 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 PPP2CBP62714 309 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 PPP2CAP67775 309 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 ITGA9Q13797 1035 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 BMPR2Q13873 1038 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 GRTP1Q5TC63 336 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 ZNF765Q7L2R6 523 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms