RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ROPN1LQ96C74 230 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 MPP4Q96JB8 637 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 SEMA3CQ99985 751 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 C1QTNF3Q9BXJ4 246 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 POPDC3Q9HBV1 291 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 SLAMF8Q9P0V8 285 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 CLEC11AQ9Y240 323 aa9.82□□□□□ -0.84
MSH2-202ENST00000406134 SLC2A3P11169 496 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 HSD17B1P14061 328 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 CR2P20023 1033 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 IL12AP29459 219 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 KPNA2P52292 529 aaKnown RBP9.81□□□□□ -0.84
MSH2-202ENST00000406134 DIO3P55073 304 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 EFEMP1Q12805 493 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 CAPRIN1Q14444 709 aaKnown RBP9.81□□□□□ -0.84
MSH2-202ENST00000406134 TRIP4Q15650 581 aaPredicted RBP9.81□□□□□ -0.84
MSH2-202ENST00000406134 PPP4R4Q6NUP7 873 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 SCN4BQ8IWT1 228 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 ADGRG5Q8IZF4 528 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 MINDY1Q8N5J2 469 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 TMEM125Q96AQ2 219 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 TSPAN17Q96FV3 270 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 FEM1CQ96JP0 617 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 MGME1Q9BQP7 344 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 CCM2LQ9NUG4 571 aaPredicted RBP9.81□□□□□ -0.84
MSH2-202ENST00000406134 CROTQ9UKG9 612 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 OAS3Q9Y6K5 1087 aaKnown RBP9.81□□□□□ -0.84
MSH2-202ENST00000406134 PIKFYVEQ9Y2I7 2098 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 A0A0U1RQS6 177 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 TBC1D4O60343 1298 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 SLC4A1P02730 911 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 CA5AP35218 305 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 AGTR2P50052 363 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 SLC12A2P55011 1212 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 ATP6V0D1P61421 351 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 RBBP5Q15291 538 aaKnown RBP9.81□□□□□ -0.84
MSH2-202ENST00000406134 PAGE3Q5JUK9 113 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 CTSL3PQ5NE16 218 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 CLYBLQ8N0X4 340 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 ATAD1Q8NBU5 361 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 OR2T34Q8NGX1 318 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 OR2T3Q8NH03 318 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 NUDT8Q8WV74 236 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 FUBP1Q96AE4 644 aaKnown RBP9.81□□□□□ -0.84
MSH2-202ENST00000406134 ZFRQ96KR1 1074 aaKnown RBP9.81□□□□□ -0.84
MSH2-202ENST00000406134 BTN2A3PQ96KV6 586 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 CCSER2Q9H7U1 834 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.81□□□□□ -0.84
MSH2-202ENST00000406134 KPNA6O60684 536 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 RPP40O75818 363 aaKnown RBP9.81□□□□□ -0.84
MSH2-202ENST00000406134 CD160O95971 181 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 RPS6KA3P51812 740 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 TAF1CQ15572 869 aaPredicted RBP9.81□□□□□ -0.84
MSH2-202ENST00000406134 KCNA10Q16322 511 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 PFKFB4Q16877 469 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 LCN8Q6JVE9 175 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 BLOC1S3Q6QNY0 202 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 PAQR3Q6TCH7 311 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 IFNL1Q8IU54 200 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 KIAA2013Q8IYS2 634 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 ALDH16A1Q8IZ83 802 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 THEM5Q8N1Q8 247 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 OR6P1Q8NGX9 317 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 SOCS4Q8WXH5 440 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 PEX13Q92968 403 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 ZUFSPQ96AP4 578 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 FAM210AQ96ND0 272 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 PLEKHG4BQ96PX9 1271 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 SMOXQ9NWM0 555 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 DMTF1Q9Y222 760 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 BTRCQ9Y297 605 aa9.81□□□□□ -0.84
MSH2-202ENST00000406134 PDLIM1O00151 329 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CLASP2O75122 1294 aaKnown RBP9.8□□□□□ -0.84
MSH2-202ENST00000406134 ZNF23P17027 643 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CCND3P30281 292 aaPredicted RBP9.8□□□□□ -0.84
MSH2-202ENST00000406134 GRIA3P42263 894 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 HSPA13P48723 471 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CCT8P50990 548 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 BTG3Q14201 252 aaPredicted RBP9.8□□□□□ -0.84
MSH2-202ENST00000406134 AAK1Q2M2I8 961 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 PLA2G4EQ3MJ16 856 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 SAMD4BQ5PRF9 694 aaKnown RBP9.8□□□□□ -0.84
MSH2-202ENST00000406134 VARS2Q5ST30 1063 aaKnown RBP9.8□□□□□ -0.84
MSH2-202ENST00000406134 SYVN1Q86TM6 617 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CMTR2Q8IYT2 770 aaKnown RBP9.8□□□□□ -0.84
MSH2-202ENST00000406134 EME1Q96AY2 570 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 FUBP3Q96I24 572 aaKnown RBP eCLIP9.8□□□□□ -0.84
MSH2-202ENST00000406134 NLE1Q9NVX2 485 aaPredicted RBP9.8□□□□□ -0.84
MSH2-202ENST00000406134 SNX13Q9Y5W8 968 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CDC7O00311 574 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 NR5A2O00482 541 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 GPR39O43194 453 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 KERAO60938 352 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 ECI2O75521 394 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 SRP72O76094 671 aaKnown RBP9.8□□□□□ -0.84
MSH2-202ENST00000406134 LINC00032P0C843 101 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 PBX3P40426 434 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 KCNQ1P51787 676 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 FAM189BP81408 668 aa9.8□□□□□ -0.84
MSH2-202ENST00000406134 CRHR2Q13324 411 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms