RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 EIF2B4Q9UI10 523 aaKnown RBP10.54□□□□□ -0.72
RPAIN-204ENST00000405578 UTP11Q9Y3A2 253 aaKnown RBP10.54□□□□□ -0.72
RPAIN-204ENST00000405578 AK5Q9Y6K8 562 aa10.54□□□□□ -0.72
RPAIN-204ENST00000405578 CHD5Q8TDI0 1954 aa10.54□□□□□ -0.72
RPAIN-204ENST00000405578 A0A1W2PPC4 97 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 RGSL1A5PLK6 1076 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 NPIPB15A6NHN6 443 aaPredicted RBP10.53□□□□□ -0.72
RPAIN-204ENST00000405578 C2orf81A6NN90 581 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 PRAMEF26H0Y7S4 382 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 SMAPO00193 183 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 WNT9AO14904 365 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 SLC31A1O15431 190 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 TTI1O43156 1089 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 LATO43561 262 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 MAGEC1O60732 1142 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 USP12O75317 370 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 PPFIA2O75334 1257 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 CRTAMO95727 393 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 PAK4O96013 591 aaPredicted RBP10.53□□□□□ -0.72
RPAIN-204ENST00000405578 ITIH2P19823 946 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 TPSB2P20231 275 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 HNRNPA2B1P22626 353 aaKnown RBP10.53□□□□□ -0.72
RPAIN-204ENST00000405578 ADRA1AP35348 466 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 GRK6P43250 576 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 PPP2CBP62714 309 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 PPP2CAP67775 309 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 KCNC4Q03721 635 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 C2orf54Q08AI8 447 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 STAT4Q14765 748 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 LRRC14Q15048 493 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 TEAD4Q15561 434 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 TPSAB1Q15661 275 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 CNGA3Q16281 694 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 ZNF284Q2VY69 593 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 TMEM259Q4ZIN3 620 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 ZDHHC20Q5W0Z9 365 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 SEL1L3Q68CR1 1132 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 LRRC66Q68CR7 880 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 DENND2CQ68D51 928 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 KCTD11Q693B1 232 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 C8orf74Q6P047 294 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 CRTC1Q6UUV9 634 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 LIPIQ6XZB0 460 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 GLT6D1Q7Z4J2 308 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 PPIL6Q8IXY8 311 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 NRSN1Q8IZ57 195 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 PIP4P2Q8N4L2 257 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 DENND6BQ8NEG7 585 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 SPDYE1Q8NFV5 336 aaPredicted RBP10.53□□□□□ -0.72
RPAIN-204ENST00000405578 SNIP1Q8TAD8 396 aaKnown RBP10.53□□□□□ -0.72
RPAIN-204ENST00000405578 FAM174AQ8TBP5 190 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 SERAC1Q96JX3 654 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 APOL2Q9BQE5 337 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 C1QTNF2Q9BXJ5 285 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 CDH19Q9H159 772 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 AASDHPPTQ9NRN7 309 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 PKD2L2Q9NZM6 624 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 FTSJ1Q9UET6 329 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 GGT7Q9UJ14 662 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 PKP3Q9Y446 797 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 ZNF711Q9Y462 761 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 NYNRINQ9P2P1 1898 aaKnown RBP10.53□□□□□ -0.72
RPAIN-204ENST00000405578 DOPEY2Q9Y3R5 2298 aa10.53□□□□□ -0.72
RPAIN-204ENST00000405578 EFCAB8A8MWE9 144 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 ERVH48-1M5A8F1 160 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 FPGTO14772 594 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 SPINT1O43278 529 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 RECQL5O94762 991 aaPredicted RBP10.52□□□□□ -0.73
RPAIN-204ENST00000405578 SLC4A1P02730 911 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 IGHV4-34P06331 123 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 PYGLP06737 847 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 PIRTP0C851 137 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 JUPP14923 745 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 PTGIRP43119 386 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 MAGEA6P43360 314 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 CHRNA4P43681 627 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 CSNK1EP49674 416 aaKnown RBP10.52□□□□□ -0.73
RPAIN-204ENST00000405578 CCT8P50990 548 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 AFF3P51826 1226 aaKnown RBP10.52□□□□□ -0.73
RPAIN-204ENST00000405578 TERF1P54274 439 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 RACK1P63244 317 aaKnown RBP10.52□□□□□ -0.73
RPAIN-204ENST00000405578 RALGDSQ12967 914 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 CALCOCO2Q13137 446 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 KIF19Q2TAC6 998 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 HOOK3Q86VS8 718 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 OR52K1Q8NGK4 314 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 BRSK1Q8TDC3 778 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 KLK6Q92876 244 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 SNF8Q96H20 258 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 LENG8Q96PV6 779 aaPredicted RBP10.52□□□□□ -0.73
RPAIN-204ENST00000405578 GORASP1Q9BQQ3 440 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 FRMD8Q9BZ67 464 aaPredicted RBP10.52□□□□□ -0.73
RPAIN-204ENST00000405578 SEMA4CQ9C0C4 833 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 XAB2Q9HCS7 855 aaKnown RBP10.52□□□□□ -0.73
RPAIN-204ENST00000405578 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.52□□□□□ -0.73
RPAIN-204ENST00000405578 BFARQ9NZS9 450 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 ZFR2Q9UPR6 939 aaKnown RBP10.52□□□□□ -0.73
RPAIN-204ENST00000405578 SHOC2Q9UQ13 582 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 NEU2Q9Y3R4 380 aa10.52□□□□□ -0.73
RPAIN-204ENST00000405578 SNX11Q9Y5W9 270 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms